Neogale vison (American mink): 122918664
Help
Entry
122918664 CDS
T08764
Symbol
TNPO1
Name
(RefSeq) transportin-1 isoform X1
KO
K18752
transportin-1
Organism
nvs
Neogale vison (American mink)
Pathway
nvs03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122918664 (TNPO1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nvs03019
]
122918664 (TNPO1)
03009 Ribosome biogenesis [BR:
nvs03009
]
122918664 (TNPO1)
Messenger RNA biogenesis [BR:
nvs03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
122918664 (TNPO1)
Ribosome biogenesis [BR:
nvs03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
122918664 (TNPO1)
Pre-60S particles
122918664 (TNPO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_EZ
HEAT
HEAT_GCN1
TPR_IMB1
HEAT_2
Arm
Vac14_Fab1_bd
TOR1L1_N
IBN_N
Cnd1
TPR_IPO5
HEAT_EF3_N
HEAT_MROH2B_C
TPR_DNAAF5
PDS5
Adaptin_N
MMS19_C
HEAT_GCN1_C
Ltn1_1st
CEP104-like_TOG
HEAT_GCN1_C_2
HEAT_Maestro
INTS7_N
UNC45-central
TPR_TTI1_C
Dopey_N
RTP1_C1
SCD
HEAT_DAAF5
VPS15-like_hel
ARM_TBCD
DUF3689
Motif
Other DBs
NCBI-GeneID:
122918664
NCBI-ProteinID:
XP_044123306
UniProt:
U6CXD6
LinkDB
All DBs
Position
1:complement(217634512..217728744)
Genome browser
AA seq
898 aa
AA seq
DB search
MVWDRQTKMEYEWKPDEQGLQQILQLLKESQSPDTTIQRTVQQKLEQLNQYPDFNNYLIF
VLTKLKSEDEPTRSLSGLILKNNVKAHFQNFPNGVTDFIKSECLNNIGDSSPLIRATVGI
LITTIASKGELQNWPDLLPKLCSLLDSEDYNTCEGAFGALQKICEDSAEILDSDVLDRPL
NIMIPKFLQFFKHSSPKIRSHAVACVNQFIISRTQALMLHIDSFIENLFALAADEEPEVR
KNVCRALVMLLEVRMDRLLPHMHNIVEYMLQRTQDQDENVALEACEFWLTLAEQPICKDV
LVRHLPKLIPVLVNGMKYSDIDIILLKGDVEEDETIPDSEQDIRPRFHRSRTVAQQHDED
GIEEEDDDDDEIDDDDTISDWNLRKCSAAALDVLANVYRDELLPHILPLLKELLFHHEWV
VKESGILVLGAIAEGCMQGMIPYLPELIPHLIQCLSDKKALVRSITCWTLSRYAHWVVSQ
PPDTYLKPLMTELLKRILDSNKRVQEAACSAFATLEEEACTELVPYLAYILDTLVFAFSK
YQHKNLLILYDAIGTLADSVGHHLNKPEYIQMLMPPLIQKWNMLKDEDKDLFPLLECLSS
VATALQSGFLPYCEPVYQRCVNLVQKTLAQAMLNNAQPDQYEAPDKDFMIVALDLLSGLA
EGLGGNIEQLVARSNILTLMYQCMQDKMPEVRQSSFALLGDLTKACFQHVKPCIADFMPI
LGTNLNPEFISVCNNATWAIGEISIQMGIEMQPYIPMVLHQLVEIINRPNTPKTLLENTA
ITIGRLGYVCPQEVAPMLQQFIRPWCTSLRNIRDNEEKDSAFRGICTMISVNPSGVIQDF
IFFCDAVASWINPKDDLRDMFCKILHGFKNQVGDENWRRFSDQFPLPLKERLAAFYGV
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atggtgtgggaccggcaaaccaagatggagtatgagtggaaacctgacgagcaagggctt
cagcaaatcctgcagctgctgaaggagtcccagtccccagacaccaccatccagagaacc
gtgcaacaaaaactggaacaactcaatcaatatccagattttaacaactacctgattttt
gttcttacaaaattaaaatctgaagatgaacccacaaggtcattgagtggtctcatttta
aagaataacgtgaaagcgcattttcagaacttcccaaatggtgtgacagactttattaag
agtgaatgtttaaacaatatcggtgactcctctcctttgattagagccactgtaggtatt
ttgattacaaccatagcctccaagggagaattgcagaattggcctgacctcctaccgaaa
ctctgtagcctgttggattctgaagattacaacacttgtgagggagcatttggcgccctt
cagaagatctgtgaagattctgctgagattttagatagtgatgtgttggaccgtcctctc
aacatcatgatccccaaatttttacagttcttcaagcacagtagtccaaaaatcaggtct
catgctgttgcatgtgtcaatcagtttatcatcagtaggactcaagctctgatgttgcac
attgattcttttattgagaacctctttgctttggctgctgatgaagaaccagaggtacgg
aaaaatgtatgccgggcacttgtgatgttgcttgaagttcgaatggatcgcctgcttcct
cacatgcataacatagttgagtacatgctacagaggacgcaagatcaagacgaaaatgta
gctttagaagcctgtgaattctggctcactttggctgagcagcccatatgcaaagatgta
cttgtaaggcatcttcctaaattgattcctgtattagtgaatgggatgaagtactcagat
atagatattatcctacttaagggtgatgttgaagaagatgaaacaattcctgatagtgaa
caggatataaggccacgttttcatcgatcaaggacagtggctcagcagcatgatgaagat
ggaattgaagaggaggatgatgatgatgatgaaattgatgatgatgatacaatttctgac
tggaatctaagaaaatgttctgctgctgccctagatgttcttgcaaatgtgtatcgtgat
gagcttttgccacacattttgccccttttgaaagaactgctttttcatcatgaatgggtt
gttaaagaatctggcatcttggttttaggagcaattgctgaaggttgtatgcaaggcatg
attccgtacttgcctgagctcattccccaccttattcagtgcctctctgataaaaaggct
cttgtgcgttccataacgtgctggactcttagccgctatgcacactgggtagtcagccag
ccccctgatacgtacctgaagccattaatgacagaattgctaaagcgaatccttgacagc
aacaagagagtacaagaagctgcctgcagtgcctttgctaccttagaagaggaggcttgt
acggaacttgttccttaccttgcttatatacttgataccttggtcttcgcttttagtaaa
taccagcataagaacctgctcattctttatgatgccataggaactttagcagattcagta
ggacatcatttaaacaaaccagaatatattcagatgctaatgcctccactgatccagaaa
tggaacatgttaaaggatgaagataaagatctcttccctttacttgagtgcctatcttca
gttgccacagccctgcagtctggtttccttccatactgtgaacctgtgtaccagcgttgt
gtaaacctagtacagaagactcttgcacaagccatgctgaacaatgctcaaccagatcag
tatgaggctcctgataaagattttatgatagtggctcttgatttactcagtggcctggct
gaagggcttggaggcaacattgaacagctagtagcccgaagtaacattctaacactaatg
tatcagtgcatgcaggataaaatgccagaagttcggcagagttccttcgccctgttaggt
gacctgacaaaagcttgctttcagcatgttaagccttgtatagctgatttcatgcctata
ctgggaaccaacctaaatccagagttcatttcagtctgcaataatgccacatgggcaatt
ggagaaatctccattcagatgggtatagagatgcagccttatattcctatggtgttgcac
cagcttgtagaaatcattaacagacccaacacaccaaagacgttgttagagaatacagca
ataacaattggtcgtcttggttacgtttgtcctcaagaggtggcccccatgctacagcag
tttataagaccctggtgcacctctctgagaaacataagggacaatgaggaaaaggattca
gcgtttcgtgggatttgtaccatgatcagtgtgaatcccagtggagtaatccaagatttt
atatttttttgtgatgctgttgcatcgtggattaacccaaaagatgatctgagagacatg
ttctgtaagatccttcacggatttaaaaatcaagttggggatgaaaattggaggcgtttc
tctgaccagtttccgcttcccttaaaagagcgtcttgcagctttttacggtgtttaa
DBGET
integrated database retrieval system
