Neogale vison (American mink): 122918780
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Entry
122918780 CDS
T08764
Symbol
OCLN
Name
(RefSeq) occludin
KO
K06088
occludin
Organism
nvs
Neogale vison (American mink)
Pathway
nvs03272
Virion - Hepatitis viruses
nvs04382
Cornified envelope formation
nvs04514
Cell adhesion molecules
nvs04530
Tight junction
nvs04670
Leukocyte transendothelial migration
nvs05160
Hepatitis C
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
122918780 (OCLN)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
122918780 (OCLN)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
122918780 (OCLN)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
122918780 (OCLN)
09158 Development and regeneration
04382 Cornified envelope formation
122918780 (OCLN)
09160 Human Diseases
09172 Infectious disease: viral
05160 Hepatitis C
122918780 (OCLN)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
nvs01009
]
122918780 (OCLN)
Protein phosphatases and associated proteins [BR:
nvs01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
122918780 (OCLN)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Occludin_ELL
MARVEL
Laminin_II
HBM
FapA
APG6_N
DUF4164
KxDL
GAS
TadF
TMF_TATA_bd
Swi5
PUMA_CC
DUF948
Motif
Other DBs
NCBI-GeneID:
122918780
NCBI-ProteinID:
XP_044123526
UniProt:
U6CRG2
LinkDB
All DBs
Position
1:complement(219036281..219100378)
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AA seq
521 aa
AA seq
DB search
MSSRPFESPPPYRPDEFKPNHYAPSNDVYGGDMHVRPMLSQPAYSFYPEDEILHFYKWTS
PPGVIRILSMLVIVMCIAIFACVASTLAWDRGYGTGLLGGGLGYPYSSGFGSYGGGYAYG
YNYGYGYGGYTDPRAAKGFLLAMAAFCFIAALVVFVTSVIRSDISRTRRYYLTVIILSAI
LGVMMFIATIVYIMGVNPTAQASGSIYSTQIYALCNQYYASTTTGIYMDQYLYHYCVVDP
QEAIAIVLGFMVIVAFALIIFFAVKTRGKMDRYDKSNILWDKEHVYDEQPPNVEEWVKNV
SAGTQDMPPPPSDYVERVDSPVAYSSNGKVNDKRPYPESSYKSTPVPEVVQELPVTSPVD
DFRQPRYSSSSNYETPSRRAPTKGRAGRSKRPEQDHYETDYTTGGESCDELEEDWIREYP
PITSDQQRQQYKRNFDTGLQEYKSLQAELDEVNKELSRLDKELDDYREESEEYMAAADEY
NRLKQVKGSADYKNKRNYCKQLKSKLSHIKKMVGDYDRQKT
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgcggccttttgaaagtccacctccgtacagaccagatgaattcaagcccaat
cattatgcaccaagtaatgatgtctatggtggagacatgcacgtccgacccatgctctct
cagccggcgtactctttctacccagaagatgaaattcttcacttctacaaatggacctct
cctccaggagtcattcggattttgtctatgctcgttattgtgatgtgcatcgccatattt
gcctgtgttgcctccacacttgcctgggatcgaggctatggaactggcttactgggtggc
ggactaggctacccttatagcagtggctttggtagctacggaggtggctatgcgtatggt
tataattatggttatggctatggaggctacaccgatccaagagcagcaaagggcttcctc
ctggccatggcggccttttgtttcattgccgcattggtggtatttgttaccagcgttata
cgatctgacatatctaggacaagaagatactacttgaccgtcataatactgagtgctatc
ctgggtgtcatgatgtttatcgccaccattgtctacataatgggagtcaacccaactgcc
caggcttctgggtctatatacagtacacagatatatgccctctgcaaccagtattatgcg
tctacaactactgggatctacatggatcagtatttgtatcactactgtgtggtggatccc
caagaggcaattgccattgtactggggttcatggttattgtggcttttgctttaataatt
ttctttgccgtgaaaacccgaggaaagatggatcggtatgacaagtcaaatattttgtgg
gacaaagaacatgtttatgatgaacaaccccccaatgtcgaagagtgggttaaaaacgtt
tctgcgggcacacaggacatgcctcctcccccttctgactatgtggagagagtggacagt
cctgtggcctactcttctaatggtaaagtgaatgacaagaggccctatccggagtcttcc
tacaagtcaacaccggtgccggaagtggtgcaggagctgccagtgacctcgcccgtggat
gacttcaggcagcctcgctacagcagcagcagcaactacgagacgccttccagaagagcc
cccacgaaaggcagagcaggcaggtccaagcggccggagcaggaccactatgaaacggac
tacacgactggcggcgagtcgtgcgacgagctggaggaggactggatcagggaatatcca
cctattacttcagatcaacaaagacaacagtacaagagaaattttgacactggcctgcag
gaatataagagcttacaagcagaactcgatgaggtcaataaagaactctctcgtctggat
aaagaattggatgactatagagaagaaagtgaagagtacatggctgctgccgatgagtac
aatagactgaagcaagttaagggatctgcagattacaaaaataagaggaattattgcaag
cagctgaagagcaaattgtcacacatcaagaagatggtgggagattatgacagacagaaa
acatag
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