Neogale vison (American mink): 122918819
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Entry
122918819 CDS
T08764
Symbol
SOX13
Name
(RefSeq) transcription factor SOX-13 isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
nvs
Neogale vison (American mink)
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nvs03000
]
122918819 (SOX13)
Transcription factors [BR:
nvs03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
122918819 (SOX13)
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
122918819
NCBI-ProteinID:
XP_044123602
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Position
10:72786658..72831878
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AA seq
615 aa
AA seq
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MSMRSPGSAQLAPDGVGTMVNCTVKSEGKKEPCHEALQGSAAAAEPQPGDPARAPQDAVD
SQAPAQDCSSPESNGSPEPKRPGASEAASGSQEKLDFNQHLKEVVPAIEKLLSSDWKERF
LGRSSVETKDVKGTQESLAEKELQLLVMIHQLSTLRDQLLTAHSEQKNMAAMLFEKQQQQ
MELARQQQEQIAKQQQQLIQQQHKINLLQQQIQQVNMPYVMIPAFPPSHQPLPVTPESQL
ALPIQPIPCKPVDYPLPLLHTPPAPVVKRPGAMAAHHPLQEPSQPLNLTAKPKAPELPSA
SSSPSLKMNNCGPRPPSHGAPTRDLQASPPSLPLGFLGEGDAVTKAIQDARQLLHGHSGA
LESSPNAPFRKDLISLDTSPAKERLEESCVHPLEEAMLGCDMDGSRHFPESRNSSHIKRP
MNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMSNQEKQPYYEEQARLSRQHLEK
YPDYKYKPRPKRTCIVEGKRLRVGEYKALMRTRRQDARQSYVTPPQAGQLQMSSPDVLYP
RVAGVPLAQPLVEHYVPRSLDPNMPVIVNTCSLREEGEATEDRHSVAEGELYRYSEDEDS
EGEEKSDGELVVLTD
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgaggagcccgggctctgcccagctggccccggatggcgttggcaccatggtg
aactgtaccgtcaagtcggaagggaagaaggagccctgccatgaggccctccagggctcg
gccgccgcagctgaacctcagcccggagacccagcccgggctccccaggatgctgttgac
tcccaagctccagcccaggactgtagctcccctgagagcaatgggtccccggaacccaag
agaccgggagcttctgaggctgcctctggaagccaggagaagctggacttcaaccaacat
ttaaaagaagtcgtgcccgctattgagaagctactgtccagtgactggaaggagaggttt
ctgggaaggagctctgtggaaaccaaagatgtcaaagggacccaggagagcctggccgag
aaggagctccagctcctggtcatgatccaccagctgtccacgctgcgggaccagctcctg
acggcgcactccgagcagaagaacatggctgccatgctgttcgagaagcagcagcagcag
atggagctggcccggcagcagcaggagcagatcgccaagcagcagcagcagctgattcag
cagcaacataagatcaacctcctccagcagcagatccagcaggtcaacatgccttatgtc
atgatcccggccttccccccgagccaccagcccctgcctgtcactcccgagtcccagctg
gccttgcctattcagcccatcccctgcaaaccagtggattaccccctgccgctgctgcac
acgccccctgcccccgtggtgaagaggccgggggccatggctgcccaccaccccctgcag
gaaccctcccagcccctgaacctcacggccaaacccaaggcccccgagctgcccagtgcc
tccagctcccccagcctgaagatgaacaattgtggaccccgccccccgagccatggggcc
cccacacgggacctgcaggccagcccgcccagcctgccactgggcttcctcggtgaaggg
gacgctgtcaccaaagccattcaggatgctcgacagctgctgcatggccacagtggggcg
ttagagagctctcccaatgctcccttccggaaggacctcatcagcctggacacatccccg
gccaaggagcggctggaggagagttgcgtgcacccccttgaagaagccatgttgggctgc
gacatggacggctcccgccactttcccgagtcccgcaacagcagccacatcaagaggccc
atgaatgccttcatggtgtgggccaaggatgagcgaaggaagatcctccaagccttccca
gacatgcacaactctagcatcagcaagatccttggctcccgctggaagtccatgagcaac
caggagaagcagccgtactacgaggagcaggcaaggctgagccgccagcacctggaaaag
taccccgactacaagtacaagccgcggcccaagcgcacgtgtatcgtggagggcaagcgg
ctccgggtgggcgagtacaaggccctgatgaggacgcggcgccaggacgcccgccagagc
tacgtgactcccccccaggccggccagctgcagatgagctcccccgacgtcctgtacccg
cgggtggcaggcgtgcccctggctcagcccctggtggagcactacgtgccccggagcctg
gaccccaacatgcctgtcatcgtcaacacctgcagcctcagggaggagggtgaggccacg
gaagacaggcactcggtggcggagggcgagctgtaccggtacagcgaggacgaggactcg
gagggcgaggagaagagcgacggggagctggtggtgctcacagactga
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