Neogale vison (American mink): 122919129
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Entry
122919129 CDS
T08764
Symbol
NUP54
Name
(RefSeq) nucleoporin p54 isoform X1
KO
K14308
nuclear pore complex protein Nup54
Organism
nvs
Neogale vison (American mink)
Pathway
nvs03013
Nucleocytoplasmic transport
nvs05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122919129 (NUP54)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
122919129 (NUP54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nvs03019
]
122919129 (NUP54)
Messenger RNA biogenesis [BR:
nvs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122919129 (NUP54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
XhlA
Motif
Other DBs
NCBI-GeneID:
122919129
NCBI-ProteinID:
XP_044123908
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All DBs
Position
11:6730335..6765816
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AA seq
562 aa
AA seq
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MAFNFGAPAGTSGTAAATAAPAGFGGLETANSTASGFNFGGFGLTANPAVNFNIGNFGVP
TTSATPFSFGNSLASAGGFGGFGTTTTTAGSAFSFSAPANTGTTGLFGGTQNKGFGFGTG
FGTTTGSSTGLGTGLGTGLGFGGFNTQQQPQQTTLGGLFSQPTQAPTQSNQLINTASALS
APTLLGDERDAILAKWNQLQAFWGTGKGYFNNNIPPVEFTQENPFCRFKAVGYSCMPNNK
DEDGLVVLVFNKKETDIRSQQQQLVESLHKVLGGNQTLTVNVEGIKTLPDDQTEVVIYVV
ERSPNGTSRRVPATTLYAHFEQTNIKTQLQQLGVTLSMTRTELSPAQIKQLLQNPPAGVD
PIIWEQAKVDNPDSEKLIPVPMVGFKELLRRLKVQDQMTKQHQTRLDIISEDISELQKNQ
TTTMAKIAQYKRKLMDLSHRTLQVLIKQEIQRKSGYAIQADEEQLRVQLDTIQCELNAPT
QFKGRLNELMSQIRMQNHFGAVKSEERYYIDADLLREIKQHLKQQQEGLSHLISIIKDDL
EDIKLVEHGLNETIHIRGGGFS
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggctttcaactttggggctcctgcgggcacctccggcaccgctgcagccactgcggcg
cccgcgggattcggtgggcttgagaccgccaactccaccgccagtgggtttaattttggg
ggtttcggattaaccgctaatcccgcagtgaactttaatattgggaacttcggcgttccg
acgacctcggcgacgccgttcagttttggtaacagcctggcgagcgcaggtgggtttgga
ggatttgggacaacaactacaacagcaggctctgcattcagcttttcggctccagctaac
acaggcactactggactctttggtggtactcagaacaaaggttttggctttggtactggt
tttggcacaacaactggaagtagtactggcttaggtactggtttgggaactggactggga
tttggaggatttaatacacagcagcagccacagcagaccacattaggtggtctcttcagt
caacccacacaagctcctacacagtccaaccaactgataaatactgcaagtgctctttct
gctccaacgctattaggagatgagagggatgctattttagcaaaatggaatcaactacag
gccttttggggaacaggaaaaggatatttcaacaataacattccaccagtggagttcaca
caagaaaatcccttttgccgatttaaggcagtaggatatagttgtatgcccaataataaa
gatgaagatgggctggtggttttagttttcaacaaaaaagaaacagatattcgaagccaa
caacagcagttggtagaatcattgcataaagttttgggaggaaaccagacccttactgta
aatgtagagggtattaaaacattgccagatgatcagacagaagttgtcatttatgttgtt
gagcgttctccaaatggtacttcaagaagagttcctgctacaacactatatgcccatttt
gaacaaacgaatataaaaacacagttgcagcaacttggagtaaccctttctatgactaga
actgaactttctcctgcgcaaatcaaacagctcttacagaatcctcctgctggtgtcgat
cctattatctgggaacaagcgaaggtggacaaccctgattcagaaaagttaattcctgta
cccatggtgggtttcaaagaacttcttcgaagactgaaggttcaagaccagatgactaag
cagcatcagaccagattagatatcatatctgaagatatcagtgaattacagaagaatcaa
actacaactatggccaaaattgcacaatataagaggaaactcatggacctttcccacaga
accttacaggtcctgatcaaacaggaaatccagaggaagagtgggtacgccatccaggcg
gacgaggagcagttgcgagttcagctggacacaattcagtgtgaactgaacgcacccacc
cagtttaagggccgactaaatgagctgatgtcccaaatcaggatgcagaatcattttggc
gcagtcaaatctgaggagcgatactacatagatgcagatctgctacgggaaatcaagcag
catttaaaacaacaacaggaaggcctcagccacctgatcagcatcataaaagatgacttg
gaagacatcaagttggtagaacacgggttgaacgaaaccatccacatcagaggtgggggc
tttagctga
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