KEGG   Neogale vison (American mink): 122919129
Entry
122919129         CDS       T08764                                 
Symbol
NUP54
Name
(RefSeq) nucleoporin p54 isoform X1
  KO
K14308  nuclear pore complex protein Nup54
Organism
nvs  Neogale vison (American mink)
Pathway
nvs03013  Nucleocytoplasmic transport
nvs05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:nvs00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    122919129 (NUP54)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    122919129 (NUP54)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nvs03019]
    122919129 (NUP54)
Messenger RNA biogenesis [BR:nvs03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     122919129 (NUP54)
SSDB
Motif
Pfam: Nup54 Nup54_C XhlA
Other DBs
NCBI-GeneID: 122919129
NCBI-ProteinID: XP_044123908
LinkDB
Position
11:6730335..6765816
AA seq 562 aa
MAFNFGAPAGTSGTAAATAAPAGFGGLETANSTASGFNFGGFGLTANPAVNFNIGNFGVP
TTSATPFSFGNSLASAGGFGGFGTTTTTAGSAFSFSAPANTGTTGLFGGTQNKGFGFGTG
FGTTTGSSTGLGTGLGTGLGFGGFNTQQQPQQTTLGGLFSQPTQAPTQSNQLINTASALS
APTLLGDERDAILAKWNQLQAFWGTGKGYFNNNIPPVEFTQENPFCRFKAVGYSCMPNNK
DEDGLVVLVFNKKETDIRSQQQQLVESLHKVLGGNQTLTVNVEGIKTLPDDQTEVVIYVV
ERSPNGTSRRVPATTLYAHFEQTNIKTQLQQLGVTLSMTRTELSPAQIKQLLQNPPAGVD
PIIWEQAKVDNPDSEKLIPVPMVGFKELLRRLKVQDQMTKQHQTRLDIISEDISELQKNQ
TTTMAKIAQYKRKLMDLSHRTLQVLIKQEIQRKSGYAIQADEEQLRVQLDTIQCELNAPT
QFKGRLNELMSQIRMQNHFGAVKSEERYYIDADLLREIKQHLKQQQEGLSHLISIIKDDL
EDIKLVEHGLNETIHIRGGGFS
NT seq 1689 nt   +upstreamnt  +downstreamnt
atggctttcaactttggggctcctgcgggcacctccggcaccgctgcagccactgcggcg
cccgcgggattcggtgggcttgagaccgccaactccaccgccagtgggtttaattttggg
ggtttcggattaaccgctaatcccgcagtgaactttaatattgggaacttcggcgttccg
acgacctcggcgacgccgttcagttttggtaacagcctggcgagcgcaggtgggtttgga
ggatttgggacaacaactacaacagcaggctctgcattcagcttttcggctccagctaac
acaggcactactggactctttggtggtactcagaacaaaggttttggctttggtactggt
tttggcacaacaactggaagtagtactggcttaggtactggtttgggaactggactggga
tttggaggatttaatacacagcagcagccacagcagaccacattaggtggtctcttcagt
caacccacacaagctcctacacagtccaaccaactgataaatactgcaagtgctctttct
gctccaacgctattaggagatgagagggatgctattttagcaaaatggaatcaactacag
gccttttggggaacaggaaaaggatatttcaacaataacattccaccagtggagttcaca
caagaaaatcccttttgccgatttaaggcagtaggatatagttgtatgcccaataataaa
gatgaagatgggctggtggttttagttttcaacaaaaaagaaacagatattcgaagccaa
caacagcagttggtagaatcattgcataaagttttgggaggaaaccagacccttactgta
aatgtagagggtattaaaacattgccagatgatcagacagaagttgtcatttatgttgtt
gagcgttctccaaatggtacttcaagaagagttcctgctacaacactatatgcccatttt
gaacaaacgaatataaaaacacagttgcagcaacttggagtaaccctttctatgactaga
actgaactttctcctgcgcaaatcaaacagctcttacagaatcctcctgctggtgtcgat
cctattatctgggaacaagcgaaggtggacaaccctgattcagaaaagttaattcctgta
cccatggtgggtttcaaagaacttcttcgaagactgaaggttcaagaccagatgactaag
cagcatcagaccagattagatatcatatctgaagatatcagtgaattacagaagaatcaa
actacaactatggccaaaattgcacaatataagaggaaactcatggacctttcccacaga
accttacaggtcctgatcaaacaggaaatccagaggaagagtgggtacgccatccaggcg
gacgaggagcagttgcgagttcagctggacacaattcagtgtgaactgaacgcacccacc
cagtttaagggccgactaaatgagctgatgtcccaaatcaggatgcagaatcattttggc
gcagtcaaatctgaggagcgatactacatagatgcagatctgctacgggaaatcaagcag
catttaaaacaacaacaggaaggcctcagccacctgatcagcatcataaaagatgacttg
gaagacatcaagttggtagaacacgggttgaacgaaaccatccacatcagaggtgggggc
tttagctga

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