Neogale vison (American mink): 122919199
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Entry
122919199 CDS
T08764
Symbol
PCDH18
Name
(RefSeq) protocadherin-18 isoform X1
KO
K16499
protocadherin delta 2
Organism
nvs
Neogale vison (American mink)
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
nvs04515
]
122919199 (PCDH18)
Cell adhesion molecules [BR:
nvs04515
]
Cadherins
Protocadherins
122919199 (PCDH18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
TMEM154
PAH
Syndecan
Cadherin_C_2
MPS-4
DUF3418
Motif
Other DBs
NCBI-GeneID:
122919199
NCBI-ProteinID:
XP_044124023
LinkDB
All DBs
Position
11:74236154..74249681
Genome browser
AA seq
1135 aa
AA seq
DB search
MCQMNAKMHFRFGFALLMLSFSYDVLGKNLKYRIYEEQRVGSVIARLSEDVADVLVKLPN
PSTVRFRAMQRGNSPLLVVNEDNGEISIGAKIDREQLCQKNLNCSIEFDVITLPTEHLQL
FHIEVEVLDINDNSPQFSRSVIPIEISESAAVGTRIPLDSAFDPDVGENSLHTYSLSAND
FFNIEVRTRTDGAKYAELIVVRELDRELKSSYELQLTASDMGVPQRSGSSILKISISDSN
DNSPAFEQQSYIIQLLENSPVGTLLLDLNATDPDEGANGKIVYSFSSHVSPKIIETFKID
SERGHLTLFKQVDYEITKSYEIDVQAQDLGPNSIPAHCKIIIKVVDVNDNKPEININLMS
PGKEEISYIFEGDPIDTFVALVGVQDKDSGLNGEIVCKLHGHGHFKLQKTYENNYLILTN
ATLDREKRSEYSLTIIAEDKGTPSLSTVKHFTVQINDINDNPPHFQRSRYEFAISENNSP
GAYITTVTATDPDLGENGQVTYTILESFILGSSITTYVTIDPSNGAIYALRIFDHEEVSQ
ITFVVEARDGGSPKQLASNTTVVLTIIDENDNVPVVIGPALRNNTAEISIPKGAESGFHV
TRIRAIDRDSGVNAELSCSILAGNEENIFLMDPRSCDIHTNVSMESVSYTEWELSVIIQD
KGNPQLHTKVLLKCVIFEYAESVTSTAMTSVSQASLDVSMIIIISLGAICAVLLVIMVLF
ATRCNREKKDTRSYNCRVAESTYQHHPKRPSRQIHKGDITLVPTMNGTLPIRSHHRSSPS
SSPTLERGQMGSRQSHHSHQSLNSLVTISSNHVPENFSLELTHATPAVEQVSQLLSMLHQ
GQYQPRPSFRGNKYSRSYRYALQDMDKFSLKDSGRGDSEAGDSDYDLGRDSPIDRLLGEG
FSDLFLTDGRIPAAMRLCTEECRVLGHSDQCWMPPLPSPSSDYRSNMFIPGEEFPAQPQQ
QHPHQSLEDDTQPADSGEKKKSFSTFGKDSPNDEDSGDTSTSSLLSEMSSVFQRLLPPSL
DTYAECGDVDRSNSLERRKGALPAKTAGYPQGVAAWAASTHFQNPTNSSGPPLGTHSSVQ
PSSKWLPAMEEIPENYEEDDFDNVLNHLNDGKHELMDASELVAEINKLLQDVRQS
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atgtgccaaatgaatgctaaaatgcactttagatttggttttgcactcctgatgctatct
ttcagctacgatgtactgggcaagaatctgaaatacaggatttatgaggagcagagggtt
ggatcagtaattgcaagactatcagaggatgtggctgatgttttagttaagctaccgaat
ccttccactgttcgttttcgagccatgcaaaggggaaattctcctctccttgtggtcaat
gaggataatggagaaatcagcataggggctaaaatcgaccgtgaacaactatgccagaaa
aacttgaactgttccatagagtttgatgtgatcactctacccacggagcatctgcagctt
ttccatattgaagtcgaagtgctggatattaatgacaattctccccagttttcaagatct
gtcatacctattgaaatatctgagagtgcagcagtcgggactcggatccccttggacagt
gcatttgatccagatgtgggggaaaattccctccacacatactctctctctgccaatgat
ttctttaatattgaggtccggaccaggactgatggcgccaagtatgcagaactcatagtg
gtgagagagctggatcgggagctgaagtcaagctatgagcttcagctcactgcctcagac
atgggggtgcctcagaggtccggctcatccatactaaaaataagcatttcggactccaat
gacaacagccctgcttttgagcagcagtcttatataatacaactcttagaaaactccccc
gttggcactttgctccttgatctgaatgccactgatccagacgagggcgctaatgggaag
attgtatattccttcagcagtcatgtgtctcccaaaattatagagacttttaaaatcgat
tcagaaagaggacatttgactcttttcaagcaagtggactatgaaatcaccaaatcctat
gagattgatgttcaggctcaagatttgggtccaaattcaatcccagctcattgcaaaatt
ataattaaggttgtggatgttaatgacaataagcctgaaattaacataaacctcatgtcc
cccggaaaagaagaaatatcttatatctttgaaggggatcctattgacacgtttgtggct
ttggtcggggttcaggacaaggattctgggctgaatggagaaatagtttgtaagcttcat
ggacatggtcactttaaacttcagaagacttacgaaaacaattatttaatcttgacgaat
gccacactggatagagaaaagagatctgaatacagtttgaccataatcgccgaggacaag
gggacacccagtctttctacagtaaaacattttactgttcagatcaatgatataaatgac
aatccaccccacttccagagaagtcgctatgaatttgcaatctcagagaataactcgcca
ggggcctatatcaccactgttacagccacagatcctgaccttggagaaaacgggcaagtt
acgtacacaattttggagagttttatcctgggaagttccataactacatatgtaaccatt
gacccatcgaatggagccatctatgccctcagaatctttgatcatgaggaagtgagtcag
atcacttttgtggtggaagcaagagatggaggaagtccaaagcaactcgcaagcaatacc
acagttgtgctcaccatcattgatgaaaatgacaatgtccctgtggttatagggcctgcg
ctgcgcaataatactgcagaaatctccatacccaaaggggctgaaagcggctttcatgtc
acaagaataagggcaattgacagagactctggtgtgaatgctgaactcagttgctccatc
ctagcagggaatgaggagaatatctttttaatggatccacgatcatgtgacatccatacc
aatgtgagcatggaatctgtttcctacacagaatgggagctctcggttatcatccaggac
aaaggcaatcctcagctgcataccaaagtcctcctgaagtgtgtgatttttgaatatgca
gagtcagtgacaagtacagccatgacctcagtaagccaggcatctttggatgtctccatg
attataattatttccttaggagcaatttgtgcagtgttgttggttattatggtgctgttt
gccacgaggtgtaaccgagaaaagaaggacactagatcctacaactgcagggtagcagaa
tccacttaccagcaccaccctaaacggccttccaggcagattcacaaaggggacattacc
ttggtgccaaccatgaatggcactctgcccatcagatctcatcacaggtcgtctccatct
tcgtctccgactttggaaagagggcagatgggcagccggcagagtcaccacagtcaccag
tccctcaacagtttggtgacaatttcatccaaccacgtgccagagaatttctcattagaa
ctcacccatgccactcctgctgttgagcaggtctcccagcttctttcaatgcttcaccag
gggcagtatcagccaaggccaagttttcgaggaaacaaatattccaggagctatagatat
gccctccaagacatggacaaatttagcttgaaagacagtggccgtggtgacagtgaagca
ggagacagtgattacgatttggggcgagattcaccaatagataggctgctgggtgaagga
ttcagcgacctgtttcttacagatggaagaattccagcagctatgcggctttgcacggag
gagtgcagggtcctggggcactccgaccagtgctggatgccaccgctgccctcgccgtcc
tccgactatcggagtaacatgttcattccgggggaggagttcccagcacaaccgcagcag
cagcatccgcatcagagtcttgaggacgacactcagcccgcggattctggggagaaaaag
aagagtttctccacctttgggaaggactccccgaacgacgaggactccggggataccagc
acatcctctctgctctcggaaatgagcagcgtcttccagcgcctcttgcccccttccctg
gacacctacgcggagtgcggtgacgtggatcggtccaactctctggagcgccgcaagggg
gcgctgcccgccaagactgcgggttacccgcaaggcgtggccgcctgggccgccagtacg
cattttcaaaaccccaccaacagctcgggtccccctcttggaactcactccagtgtgcag
ccttcctccaaatggctgccggccatggaggagatccccgaaaactatgaagaagatgat
tttgacaatgtgctcaaccacctcaacgacgggaaacacgaactcatggatgccagtgag
ctagtggctgagattaacaaactgcttcaagatgtccgccagagctag
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