Neogale vison (American mink): 122919222
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Entry
122919222 CDS
T08764
Symbol
PDGFRA
Name
(RefSeq) platelet-derived growth factor receptor alpha isoform X1
KO
K04363
platelet-derived growth factor receptor alpha [EC:
2.7.10.1
]
Organism
nvs
Neogale vison (American mink)
Pathway
nvs01521
EGFR tyrosine kinase inhibitor resistance
nvs04010
MAPK signaling pathway
nvs04014
Ras signaling pathway
nvs04015
Rap1 signaling pathway
nvs04020
Calcium signaling pathway
nvs04072
Phospholipase D signaling pathway
nvs04144
Endocytosis
nvs04151
PI3K-Akt signaling pathway
nvs04510
Focal adhesion
nvs04540
Gap junction
nvs04630
JAK-STAT signaling pathway
nvs04810
Regulation of actin cytoskeleton
nvs05163
Human cytomegalovirus infection
nvs05200
Pathways in cancer
nvs05206
MicroRNAs in cancer
nvs05214
Glioma
nvs05215
Prostate cancer
nvs05218
Melanoma
nvs05230
Central carbon metabolism in cancer
nvs05231
Choline metabolism in cancer
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
122919222 (PDGFRA)
04014 Ras signaling pathway
122919222 (PDGFRA)
04015 Rap1 signaling pathway
122919222 (PDGFRA)
04630 JAK-STAT signaling pathway
122919222 (PDGFRA)
04020 Calcium signaling pathway
122919222 (PDGFRA)
04072 Phospholipase D signaling pathway
122919222 (PDGFRA)
04151 PI3K-Akt signaling pathway
122919222 (PDGFRA)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122919222 (PDGFRA)
09144 Cellular community - eukaryotes
04510 Focal adhesion
122919222 (PDGFRA)
04540 Gap junction
122919222 (PDGFRA)
09142 Cell motility
04810 Regulation of actin cytoskeleton
122919222 (PDGFRA)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
122919222 (PDGFRA)
05206 MicroRNAs in cancer
122919222 (PDGFRA)
05230 Central carbon metabolism in cancer
122919222 (PDGFRA)
05231 Choline metabolism in cancer
122919222 (PDGFRA)
09162 Cancer: specific types
05214 Glioma
122919222 (PDGFRA)
05218 Melanoma
122919222 (PDGFRA)
05215 Prostate cancer
122919222 (PDGFRA)
09172 Infectious disease: viral
05163 Human cytomegalovirus infection
122919222 (PDGFRA)
09176 Drug resistance: antineoplastic
01521 EGFR tyrosine kinase inhibitor resistance
122919222 (PDGFRA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
nvs01001
]
122919222 (PDGFRA)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
nvs04090
]
122919222 (PDGFRA)
Enzymes [BR:
nvs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
122919222 (PDGFRA)
Protein kinases [BR:
nvs01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
122919222 (PDGFRA)
CD molecules [BR:
nvs04090
]
Proteins
122919222 (PDGFRA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
ig
Ig_2
VEGFR1-3_N_Ig-like
V-set
VEGFR-1-like_Ig-like
Herpes_gE
DUF3475
Kinase-like
Motif
Other DBs
NCBI-GeneID:
122919222
NCBI-ProteinID:
XP_044124056
LinkDB
All DBs
Position
11:complement(25158945..25200633)
Genome browser
AA seq
1104 aa
AA seq
DB search
MKSFHFGVLSKFSGMMGTSLVALLILGCLLPGPSLILCQLSLPSILPNENEKVVQLNSSF
SLRCFGESEVSWQYPMSEEENPNVEIRNEENNSGLFVTVLEVVNASAAHTGLYTCYYNHT
QTEEMELEGRHIYIYVPDPDVAFVPLGMTDYLVIVEEDDSAVIPCRTTDPETPVTLISSD
GVVHASYDSRQGFNGTFSVGPYICEATVRGKKFQTIPFNVYALKATSELDLEMEALKTVY
KSGETIVVTCAVFNNEVVDLQWTYPGEVKGKGITMLEEIKVPSIKLVYTLTVPKATVKDS
GDYECAARQATKEVKEMKKVTISVHEKGFIEIKPNFSPLEAVDLHEVKHFVVDVQAYPPP
RISWLKDNLTLIENLTEITTDIEKIQEIRYRSKLKLIRAKEEDSGHYTIVVQNEDDVKSY
TFELLTQVPSSILDLVDDHHGTTGGQTVRCTAEGTPLPDIEWMVCKDIKKCNNETSWAIL
ASNISNIITEVHPRDRSTVEGQVTFSRVDETIAVRCVAKNLLGAESRELKLVAPTLRSEL
TVAAAVLVLLVIVIVSLIVLVVIWKQKPRYEIRWRVIESISPDGHEYIYVDPMQLPYDSR
WEFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSEL
KIMTHLGPHLNIVNLLGACTKSGPIYIITEYCFYGDLVNYLHKNRDSFLSRHPEKPKKEL
DIFGLNPADDSTRSYVILSFENNGDYMDMKQADTTQYVPMLERKEVSKYSDIQRSLYDRP
ASYKKKSVLDSEVKNLLSDDNSEGLTLLDLLSFTYQVARGMEFLASKNCVHRDLAARNVL
LAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILL
WEIFSLGGTPYPGMMVDSTFYNKIKSGYRMAKPDHATSEVYEIMVKCWHSEPEKRPSFYH
LSEIVENLLPGQYKKSYEKIHLDFLKSDHPAVARMRVDADNAYIGVTYKNEEDKLKDWEG
SLDEQRLSADSGYIIPLPDIDPVPEEEDLGKRNRHSSQTSEESAIETGSSSSTFIKREDE
TIEDIDMMDDIGIDSSDLVEDSFL
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atgaagtccttccattttggggttttgagcaagttttctggaatgatggggacctccctt
gtggccctgctgatcttaggctgtctccttccagggcccagcctaatcctctgccagctt
tcattaccctctatccttccaaacgaaaatgaaaaggtcgtgcagctgaattcgtccttt
tctctgagatgctttggggagagtgaagtgagctggcagtaccccatgtctgaagaagag
aaccccaatgtggagatcagaaacgaggagaacaacagcggcctctttgtgactgtgctg
gaagtggtcaacgcgtccgcggcgcacacaggcctgtacacttgctattacaaccacacg
cagacggaggaaatggagctcgaaggcagacacatctacatctatgtgccagacccagat
gtagcctttgtacctttgggaatgaccgattatttagtcatcgtggaggaggatgattct
gctgtcataccttgtcgcacgactgaccccgagactccggtcaccttgataagcagtgac
ggggtggtgcacgcctcctatgacagcagacagggcttcaatgggaccttcagcgtcggg
ccctatatctgtgaagctaccgttagggggaagaagttccagaccattccatttaatgtt
tatgctctaaaagcaacatcagaacttgatctagaaatggaagctcttaaaactgtgtat
aagtcaggggagacgattgtggtcacctgtgctgtctttaacaacgaggtggtcgacctt
cagtggacgtaccccggagaagtgaaaggcaaaggcatcaccatgctggaggaaatcaag
gtcccgtccatcaaattggtgtatacgctgacggtccccaaggccacggtgaaagatagt
ggagattacgaatgtgctgcccgccaggccaccaaggaggtcaaagagatgaagaaagtc
accatttctgtccatgagaaagggttcattgaaatcaaacccaacttcagcccgttggaa
gctgtcgacctacatgaagtcaaacatttcgtggtggatgtgcaggcctacccccctccc
aggatatcctggctgaaggacaatctgactctgattgaaaatctcacagagatcaccacg
gacatagaaaagattcaggaaataagatatcggagcaaattaaagctgatccgtgctaag
gaggaagacagtggccattacacaattgtcgttcaaaacgaagacgacgtgaagagctat
acttttgaactcttaactcaagttccctcctccattctggacttggtcgacgaccaccat
ggcactacggggggacagaccgtgagatgcaccgctgaagggacgccacttcctgacatc
gagtggatggtttgcaaggatattaagaagtgtaataatgaaacttcatgggcgattttg
gccagcaatatctcaaacatcatcacggaggtccacccccgagacaggagtactgtagag
ggacaagtgacattcagcagagtggacgagaccatcgctgtccgatgtgtggccaagaac
ctccttggggctgagagccgagagctgaagctggtggctcccacactgcgatccgagctc
actgtggccgctgcggtcctcgtgctgctggtgattgtgatcgtctcactcattgtcctg
gttgtcatttggaaacagaaaccgaggtatgaaatccgttggagggtcattgaatccatc
agccctgatggacatgaatatatttatgtggacccaatgcagctgccttatgactcgaga
tgggagtttccaagagatggactcgtgcttggtcggatcctgggatctggtgcgttcggg
aaagtggttgaaggaactgcctatgggttaagccgctcccagcctgtcatgaaagtagcc
gtgaagatgctaaaacccacagccagatccagtgagaagcaagctcttatgtcggaactg
aagataatgactcacctggggccacatttgaacattgtgaacttgctgggagcctgtacc
aagtcaggccctatttacatcatcaccgagtactgcttctatggggatttggtcaactat
ttgcacaagaacagggatagcttcctgagccgccacccggagaagccgaagaaggagctg
gacattttcggattgaaccctgcggatgacagcacacggagttacgttattttatctttt
gaaaacaacggggactacatggacatgaagcaggctgacaccacacagtacgtccccatg
ctggagaggaaggaggtttctaagtactcagacatccagagatcgctgtatgatcgccca
gcctcctacaagaagaaatctgtgttagactcagaagtcaaaaacctcctttcggacgat
aactcagaaggccttactttgttggatttgttgagttttacctatcaagttgcgcgagga
atggaatttttggcttcaaaaaactgcgtccaccgggacctggctgctcgaaatgtcctc
ctggcgcaagggaaaatcgtgaagatctgtgactttggtctggccagagacatcatgcat
gattccaactacgtgtctaaaggcagcaccttcctccctgtgaagtggatggcccccgag
agcatcttcgataatctctacaccacgctgagtgacgtctggtcttatggcattctgctc
tgggagatcttttctcttggaggcacgccctacccgggcatgatggtggattcgactttc
tacaataagatcaagagcggctaccggatggccaagcccgaccatgccaccagtgaagtc
tatgagatcatggtgaagtgctggcacagtgagccagagaagagaccctccttctaccac
ctgagtgagattgtggagaatctgctgcctggacagtacaagaagagttacgagaagatt
cacctggatttcctgaagagcgaccaccccgccgtggcgcgcatgcgcgtggacgccgac
aacgcctacatcggcgtcacctacaaaaacgaggaggacaagctgaaggactgggagggc
agcctggacgagcagcggctgagtgcggacagcggctacatcatccccctgcccgacatc
gaccccgtccctgaggaggaagacctgggcaagaggaacagacacagctcgcagacctcc
gaagagagcgcaatcgagacaggttccagcagctctaccttcatcaagagagaggacgaa
accatcgaggacatcgacatgatggacgacattggcatagactcctcagacctggtagag
gacagcttcctgtga
DBGET
integrated database retrieval system
