Nocardia vulneris: V7968_02855
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Entry
V7968_02855 CDS
T10816
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
nvu Nocardia vulneris
Pathway
nvu03420
Nucleotide excision repair
nvu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nvu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
V7968_02855 (pcrA)
03430 Mismatch repair
V7968_02855 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nvu03400
]
V7968_02855 (pcrA)
Enzymes [BR:
nvu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
V7968_02855 (pcrA)
DNA repair and recombination proteins [BR:
nvu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
V7968_02855 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
V7968_02855 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
DEAD
ResIII
Motif
Other DBs
NCBI-ProteinID:
WWW20063
LinkDB
All DBs
Position
complement(587938..590544)
Genome browser
AA seq
868 aa
AA seq
DB search
MDITVAPQTQAGRAPRPDSIHNPQVTGGNAEEARSAVEEVRAVRAPVPEPPPSVDEQEQR
RVERERRRAEEAERLLDGLNPQQRAAVVHSGAPLLIVAGAGSGKTAVLTRRIAYLLAARG
VTPGQVLAITFTNKAAAEMRERVTGLVGPRANNMWVSTFHSSCVRILRMQAALLPGMNSN
FSIYDADDSRRLLTMISRDFDIDTKKYTARLLATAISNLKNELIGPQQATADAESDETEL
PALVARVYVEYQRRLRAANALDFDDLIGETVALLQNHPQVAEYYRRRFRHVLVDEYQDTN
HAQYVLVRELVGHHRAERTEDQAPPSELCVVGDADQSIYAFRGATIRNIEEFERDFPDAE
TILLEQNYRSTQHILSAANAVISRNENRRDKKLWTDSGEGDLITGYVADNEHDEASFVAR
EIDRLVDQGEANYSDVAVFYRTNNNSRALEEIFIRMGLPYKVVGGVRFYERKEVRDIVAY
LRVLENPDDAVSLRRILNTPRRGIGDRAEACVAVHAEQRGIGFAAALRDAADGKVALLNT
RAQRAIAGFLDLLEEIRAAGVQEDLDFPDVGNVVDAVLERTGYRGELEASDDPQDGARLD
NLNELVSVAREFSSEAHNNAEAAREEGLLPEVAEGEPDPGSLAAFLERVSLVADTDQIPD
EGTGVVTMMTLHTAKGLEFPVVFVTGWEDGQFPHMRALGDPTELAEERRLAYVGITRARK
RLYLSRAVVRSGWGQPVSNPESRFLQEIPGHLIDWRRLEPAGSPASRGIRRRGDSDGMER
DWTRGDGWSERPGVRPDRGPRRPAPGAVGKNNANLVLAVGDRVSDDKYGLGKVVAAEGFG
PLATVTIDFGTAGKIRLIPQYSRTLVKL
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atggacatcacggtggctccccagacgcaggccggtcgcgccccacggccggattcgatc
cataacccgcaggtcaccggtggtaacgccgaggaagcgcggtcggctgtcgaggaggtg
cgtgcggtgcgagcgccggttccggaaccgccgccgtcggtcgacgagcaggagcaacgg
cgtgtcgaacgggagcgtcggcgtgccgaggaagccgagcgcctgctcgacgggctcaat
ccgcagcagcgcgccgcggttgtgcacagtggcgccccgctgctgatcgtggccggtgcc
gggtcgggcaagaccgccgtgctcacccgtcgcatcgcctatctactcgccgcgcgcggc
gtgacgcccggtcaggtgctcgcgatcacgttcaccaacaaggctgctgccgagatgcgg
gagcgggtgaccggactggtcggtccgcgggccaacaacatgtgggtatcgacgttccac
tccagttgtgtccgaatattgcgcatgcaagccgccctgttgccgggcatgaattcgaat
ttctccatctacgatgccgatgattcgcggcgactgctcaccatgatcagtcgtgacttc
gatatcgacacgaagaaatacacggcacgactgctggcgaccgcgatctcgaatctcaag
aacgagctcatcgggccgcaacaggccaccgcggacgccgagtcggacgaaaccgaactg
cccgccctggtcgcgcgggtctacgtcgagtaccagcggcggctgcgcgcggccaacgcg
ctcgatttcgacgacctgatcggcgagacggtggcgctgctgcagaaccatccgcaggtc
gccgagtactaccggcgccgcttccggcatgtgctggtcgacgaataccaggacaccaac
cacgcgcaatacgtgctggtgcgcgaactcgtcgggcatcaccgggccgagcgcaccgag
gatcaggcgccgccgagcgaactgtgcgtggtgggcgacgcggaccagtcgatctacgcg
ttccgcggcgccaccatccgcaacatcgaagagttcgagcgcgacttccccgacgcggaa
accattctgctggaacagaactaccggtccacccagcacattctctccgccgccaacgcg
gtgatctcgcgcaacgagaaccggcgcgacaagaaactgtggaccgactccggcgaaggc
gacctgatcaccggctatgtcgccgacaacgaacacgacgaggcgtcgttcgtggcgcgg
gagatcgaccggctggtcgatcagggcgaagccaactattccgacgtcgcggtgttctac
cggaccaacaacaactcccgcgcgctggaagaaatcttcatccggatgggcctgccgtac
aaggtggtcggcggcgtccggttctatgagcgcaaggaggtccgcgacatcgtcgcgtac
ctgcgggtgctggagaaccccgacgacgcggtgagcctgcgccggatcctcaacacgcca
cgtcgcggtatcggcgaccgggccgaagcctgcgtcgccgtacacgccgagcagcggggc
atcgggttcgccgcggcactgcgggacgcggcggacggcaaagtggcgctgctgaacacc
agggcccagcgcgcgatcgccggcttcctcgacctgctcgaggagatccgggccgcgggt
gtgcaggaggacctggacttccccgatgtcgggaatgtggtcgacgcggtgctggagcgc
acgggctaccgcggcgaactggaggcctccgacgatccgcaggacggcgcccggctggac
aacctcaacgaactcgtcagcgtcgcacgggaattcagctccgaagcgcacaacaacgcg
gaggcggcccgggaagagggactgctgcccgaggtcgccgaaggcgaacccgaccccgga
tcgctcgccgcgttcctcgaacgggtctcgctggtcgccgacaccgaccagatcccggac
gaaggcaccggcgtggtcaccatgatgacgctgcacacggccaagggcctggagttcccc
gtggtgttcgtgaccggctgggaggacggccagttcccgcacatgcgggcactcggcgac
ccgaccgaactggccgaggaacgccgcctcgcctacgtcggcatcacccgggccaggaaa
cggctgtacctgagtcgcgcggtcgtgcgctccggttggggacaaccggtgtccaacccg
gaatcccgcttcctccaagagattccgggccacctgatcgattggcggcggctggagccc
gccggatccccggcgagccggggcatccgcaggcgcggcgacagcgacggcatggaacgc
gactggacccgtggcgacggctggtccgaacgccccggcgtgcgtcccgatcggggaccg
cgccgtccggcacccggtgccgtcggcaagaacaacgcgaatctggtactcgccgtaggc
gatcgggtcagcgacgacaagtacggtctcggcaaggtggtcgccgccgagggcttcggc
ccgttggcgaccgtcaccatcgacttcggcaccgccggcaagatccggctcatcccgcaa
tacagcaggacgctcgtcaaactctga
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