Nocardia vulneris: V7968_03585
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Entry
V7968_03585 CDS
T10816
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
nvu Nocardia vulneris
Pathway
nvu03020
RNA polymerase
Brite
Enzymes [BR:
nvu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
V7968_03585
Transcription machinery [BR:
nvu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
V7968_03585
DNA repair and recombination proteins [BR:
nvu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
V7968_03585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WWW20201
LinkDB
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Position
complement(769676..773629)
Genome browser
AA seq
1317 aa
AA seq
DB search
MLDVNFFDELRIGLATADDIRQWSFGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKIIYFAAYVIVGVDEELRHNELSTLEAEMEVEKKAVADQRDADLEARAQKLEAD
LAELEAEGAKSDVRRKVKDGGEREMRQLRDRAQRELDRLDEIWTTFTKLAPKQLIVDEVL
YRELIDRYGEYFTGAMGAESIQKLMENFDIDAEAENLRETIRSGKGQKKLRALKRLKVVA
AFQTNGNSPMGMVLDAVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLIDL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKLMALELFKPFVMKRLVDLNHAQNIKSAKRMVERQR
PQVWDVLEEVIAEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCEAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILSPASGRPLAMPRLDMVTGLFYLTRLEEGGKGEYK
PAAKDSAEFGVYSSPAEAQMAVDRGELTVRSLIKVRLTEQRPPKDIETALFPQGWQRGDA
WIAETTLGRVLFNELLPADYAFINEQMPKKRQATIINDLAERYPMIVVAQTVDKLKDAGF
YWATRSGVTVSMSDVLVPPEKTEIMERYEAQSDQIEKKYQRGALDHQERNNALVKIWQEA
TEEVGRALRAHYPADNPIITIVDSGATGNFTQTRTLAGMKGLVTNPKGEFIPRPIKSSFR
EGLTVLEYFINTHGARKGLADTALRTADSGYLTRRLVDVSQDVIVREHDCATERGIVVPI
AEKQPDGTIIRDAHVETSAYARTLASDAVDANGNVVVGKGADLGDPAIEALLDAGITEVK
VRSVLTCTTGTGVCATCYGRSMATGKLVDIGEAVGIVAAQSIGEPGTQLTMRTFHQGGVA
GDDITGGLPRVQELFEARVPKGKAPIAEVSGRVRLEDDDRFYKITIIPDDGGEEVVYDKL
SKRQRLRVFKHDDGTERLLSDGDHVEVGQQLLEGAADPHEVLRIMGPRQVQIHLVHEVQE
VYRSQGVSIHDKHIEVIVRQMLRRVTIIDSGATEFLPGSLTERSEFEASNRRVVAEGNEP
AAGRPVLMGITKASLATDSWLSAASFQETTRVLTDAAINCRSDKLIGLKENVIIGKLIPA
GTGINRYRNIQVQPTEEARAAAYAVPSYDDTYYSPDSFGQTTGAAVPLDDYGFSDYR
NT seq
3954 nt
NT seq
+upstream
nt +downstream
nt
gtgctagacgtcaacttcttcgatgaactccggatcggcctggccaccgccgacgacatt
cgccagtggtccttcggcgaggtgaagaagccggagaccatcaactaccgcacgctcaag
ccggagaaggacggcttgttctgcgagaagatcttcggtcccacccgggactgggagtgc
tactgcggcaagtacaagcgcgtgcgcttcaagggcatcatctgtgagcgctgtggcgtc
gaggtgacccgtgccaaggtgcgccgtgagcggatgggtcacatcgagctggccgccccg
gtcacccacatctggtacttcaagggcgtgccctcgcgcctcgggtacctgctcgacctg
gcgccgaaggatctggaaaagatcatctacttcgccgcctacgtcatcgtcggggtcgac
gaggagctgcgccacaacgagctcagcaccctcgaagccgagatggaggtcgagaagaag
gccgtcgccgatcagcgcgacgccgacctggaggcccgcgcccagaagctcgaggccgac
ctggccgaactcgaggccgagggtgccaagtccgacgtgcgccgcaaggtcaaggacggc
ggcgagcgcgagatgcgtcagctgcgcgaccgggcccagcgtgagctggaccggctcgac
gagatctggaccaccttcaccaagctggccccgaagcagctcatcgtcgacgaggtgctc
taccgcgagctgatcgaccgctacggcgagtacttcaccggcgccatgggtgcggagtcc
atccagaagctgatggagaacttcgacatcgacgccgaggccgagaacctgcgggagacc
atccgcagcggcaagggccagaagaagctgcgtgcgctcaagcggctcaaggtcgtcgcg
gcgttccagaccaacggcaactcgccgatgggcatggtgctcgacgccgttccggtgatc
ccgccggagctgcgtccgatggttcagctcgacggtggccgcttcgccacctccgacctg
aacgacctgtaccgccgcgtgatcaaccgcaacaaccgcctcaagcgactgatcgatctg
ggtgcgcccgagatcatcgtcaacaacgagaagcggatgctgcaggagtccgtggacgcg
ctgttcgacaacggccgccgcggccgcccggtcaccggaccgggtaaccgcccgctgaag
tcgctgagcgatctgctcaagggcaagcagggccggttccgccagaacctgctcggcaag
cgcgtcgactactcgggccgttcggtcatcgtcgtcggcccgcagctgaagctgcaccag
tgcggtctgcccaagctgatggcgctggagctgttcaagccgttcgtgatgaagcgcctg
gtcgacctgaaccacgcgcagaacatcaagtccgccaagcggatggtcgagcggcagcgt
ccccaggtgtgggatgtcctcgaagaggtcatcgccgagcacccggtgctgctgaaccgc
gcgcccaccctgcaccgcctcggcatccaggcgttcgagccgcagctcgtcgagggtaag
gcgatccagctgcacccgctcgtctgtgaagcgttcaacgccgacttcgacggtgaccag
atggccgtgcacctgccgctgtccgcggaggcgcaggccgaggcccgcatcctgatgctg
tcctcgaacaacatcctgtcgccggcctcgggtcgcccgctggccatgccgcgtctggac
atggtgaccggcctgttctacctgacccgcctcgaagagggtggcaagggcgaatacaag
ccggccgcaaaggattccgccgagttcggcgtgtactcctcgcccgccgaggcgcagatg
gcggtggaccgcggtgagctcaccgtgcgttcgctgatcaaggtgcggctcaccgagcag
cgcccgccgaaggacatcgagacggcgctgttcccgcagggctggcagcgcggtgacgcg
tggatcgcggagaccaccctcggtcgcgtgctcttcaacgagctgctcccggcggactac
gcgttcatcaacgagcagatgccgaagaagcgccaggccacgatcatcaacgatctggcc
gagcgctacccgatgatcgtggtcgcgcagaccgtcgacaagctgaaggacgcgggcttc
tactgggccacccgttccggcgtgacggtctccatgtccgacgtgctcgtgccgccggag
aagaccgagatcatggagcgctacgaggcgcagtccgaccagatcgagaagaagtaccag
cgtggtgcgctcgatcaccaggagcgcaacaacgccctggtgaagatctggcaggaagcg
accgaagaagtcggtcgcgcgctgcgggcgcactacccggccgacaacccgatcatcacg
atcgtcgactcgggcgccaccggtaacttcacccagactcgtaccctcgccggtatgaag
ggcctggtgacgaacccgaagggtgagttcatcccgcggccgatcaagtcctccttccgt
gagggcctgacggtgctggagtacttcatcaacacccacggcgcgcgtaagggtctggcc
gacaccgcgctgcgtaccgccgactcgggttacctgacccgtcgtctggtggacgtctcg
caggacgtgatcgtgcgcgagcacgactgcgccaccgagcgcggcatcgtggtgccgatc
gcggagaagcagccggacggcaccatcatccgcgacgcgcacgtcgagaccagtgcctac
gcccggacgctcgcgtccgacgcggtcgacgccaacggcaacgtcgtcgtcggcaagggc
gccgacctcggcgacccggccatcgaggcgctgctcgacgcgggtatcaccgaggtgaag
gtccgctccgtgctgacctgcaccaccggcaccggcgtgtgtgcgacctgctacggccgc
tccatggcgaccggcaagctggtcgacatcggtgaggccgtcggcatcgtcgccgcacag
tccatcggtgagcccggtacccagctgaccatgcgtaccttccaccagggtggtgtcgcg
ggcgatgacatcaccggcggtctgccccgggtgcaggagctcttcgaggctcgtgtgccg
aagggcaaggcgcccatcgccgaggtctccggccgggtgcggctcgaggacgacgatcgc
ttctacaagatcaccatcatcccggatgacggtggcgaagaggttgtctacgacaagctc
tcgaagcggcagcggctgcgtgtcttcaagcacgacgacggcaccgagcgtctgctctcc
gacggcgaccacgtcgaggtcggccagcagctgctggaaggcgcggcggatccgcacgag
gtgctgcgcatcatgggtccccgtcaggtgcagatccacctggtccacgaggtccaggag
gtctaccgctcgcagggtgtgtcgatccacgacaagcacatcgaggtcatcgtgcgccag
atgctgcgtcgcgtgacgatcatcgattcgggtgccacggagttcctgcccggttcgctc
accgagcgttccgagttcgaggcctccaaccgtcgcgtcgtcgccgagggcaacgagccc
gcggccggccgcccggtgctgatgggtatcacgaaggcgtcgctcgcgaccgattcgtgg
ctgtcggcggcgtccttccaggagaccactcgagtcctgacggacgcggcgatcaactgc
cgctccgacaagctcatcggcctcaaggagaacgtgatcatcggtaagctgatcccggcc
ggtaccggcatcaaccggtaccgcaacatccaggtgcagccgaccgaagaagcccgtgcc
gccgcgtacgcggtgccgtcctacgacgacacctactacagcccggacagcttcggtcaa
accaccggcgccgcagtcccgctcgacgactacggtttcagcgactaccgctag
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