Nocardia vulneris: V7968_06665
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Entry
V7968_06665 CDS
T10816
Name
(GenBank) replicative DNA helicase
KO
K02314
replicative DNA helicase [EC:
5.6.2.3
]
Organism
nvu Nocardia vulneris
Pathway
nvu03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
nvu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
V7968_06665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nvu03032
]
V7968_06665
Enzymes [BR:
nvu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
V7968_06665
DNA replication proteins [BR:
nvu03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
V7968_06665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DnaB_C
DnaB
LAGLIDADG_3
Intein_splicing
AAA_25
Hom_end
Motif
Other DBs
NCBI-ProteinID:
WWW20768
LinkDB
All DBs
Position
1409770..1413669
Genome browser
AA seq
1299 aa
AA seq
DB search
MAVVDDRGHADFPPEPPGEDFGRQPPHDMAAEQSVLGGMLLSKDAIADVIEVMRPGDFYR
PAHQAVYDTILDLYGRGEPADPVTVAAGLDRRGELKRIGGPPYLVTLTQTVPTAANASFY
AEIVAEKAILRRLVEAGTRIVQYGYAGADGQDIAEVVDRAQAEVYEVTERRTTEDFLPLE
ELLQPTMDEIDSIASRGGISLGVPTGFTELDELTNGLHPGQMIIVAARPGVGKALALDTP
LPTPTGWTTMGEVRVGDELLDAAGHPTRVVAATDILTDRPCYEVEFSDGTVLVADEEHQW
RTETRASRRSAREAASGKHNQRTFAAIRTTGEIARTLRCSTADRRINHSVTNARPLQLPA
RDLLVPPYTLGAWLGDGTSATAQLTTADPEIVARVEAEGVVAVPSASARLRYCLQLPADE
PVAARACVVCGAEFVPFTSEVRTCGRSCGGKARLHSAPVPAPTCTHCGGPSIGLRLCQSC
RNAIGSVQARLRTIGVLGDKHIPGAYLRASEQQRRALLAGLLDTDGTVTHGGSVQFSVTS
ERLFRDVQELVVSLGYRCHVATKRVRGRSESSSVAYTMTFATDDEVFGLYRKALLHKERR
AARNTARSGARYIVDVRRIESVPVRCVEVDNAEHLYLAGRSMVPTHNSTLGMDFMRSCSI
KHGLPSVIFSLEMSRTEIVMRLLSAEAKIKLGDMRAGRMSDDDWTKLARRMSEISEAPLF
VDDSPNLTMMEIRAKARRLKQRHDLKLVVVDYLQLMTSGKKVESRQQEVSDFSRNLKLLA
KELEVPVVAISQLNRGPEQRTDKRPMVSDLRESGCLPASTRILRADNGTESTLGELLASG
EQPLVWSLDERMRMVARPMVKVFPSGRKEVFRLRLASGRVVDATGNHPFLTVDGWIALEK
LAVGDRLATPRHVPEPVHTTRMPDAKIILLAHMIGDGSCVKRQPLRYASIDEANLDAVTA
AATHFGVTAVRDDHPAARVSTLRLRAPEHLTHGKRNPIAAWLDELGLFGLRSYEKFVPKP
VFELPNDQVALFLRHLWATDGSVRWDDTGGQARVYYSSTSRRLIDDVAQLLLRVGVHGRI
KQVRKAGYRDCWHLTIDGSDNQTVFLRDVGVHGARGQAADAALTHLAPLASNTNVDTVPK
EVWNQVRSLLATKQMTHREFSAAMGSRFCGSTMWKRSPSRSRLARVAVVLDDADIEMLAT
NDVFWDKVVEITSLGEQDVYDGTVPGTHNFVAQGISVHNSLEQDADMVILLHRPDAFERD
DPRGGEADLILGKHRNGPTATITVAHQLHLSRFVDMARG
NT seq
3900 nt
NT seq
+upstream
nt +downstream
nt
atggcagtcgtcgacgaccgcggacacgcggacttcccgcccgaaccccccggcgaggac
ttcggcaggcaaccaccgcacgacatggcggccgaacagtccgtgctcggcggcatgctg
ctgagcaaggacgccatcgccgacgtcatcgaggtcatgcgccccggcgacttctaccgt
cccgcgcatcaagccgtctacgacaccatcctcgacctgtacgggcgcggtgaacccgcc
gacccggtgaccgtcgcggccggcctggaccgccgcggcgaactcaagcgcatcggcggc
ccgccctacctggtcacgctcacccagaccgtccccaccgccgccaacgccagcttctac
gccgagatcgtcgccgagaaggccatcctgcgccgcctcgtcgaggcgggcacccgcatc
gtccagtacggctacgcgggcgccgacggccaggacatcgccgaggtcgtcgaccgcgcc
caggccgaggtctacgaggtcaccgaacgccgcaccaccgaagacttcctcccgctcgaa
gaactcctgcagcccacgatggacgaaatcgactccatcgccagccgcggcggcatctcc
ctcggcgtccccaccggcttcaccgaactggacgaactcaccaacggcctgcaccccggc
caaatgatcatcgtcgccgcccgcccgggcgtgggcaaagccctcgccctcgacaccccg
ctccccacccccaccggctggaccaccatgggcgaggtccgtgtcggcgacgaactcctc
gacgccgcaggccaccccacccgcgtggtcgccgccaccgacatcctcaccgaccgcccg
tgctacgaggtcgaattctccgacgggacagtcctcgtcgcggatgaggaacatcagtgg
cgtaccgagacgcgagcttcccgtaggtcggctcgcgaagccgcatccggcaagcacaat
cagcgcaccttcgccgcgatccgtaccaccggcgagatcgcgcggacattgcgctgcagc
acagccgaccgccggatcaaccattcggtgaccaacgctcgaccactacagttgcccgcc
cgcgacctcttggtgccgccttataccctcggtgcctggctcggcgacggtacttcggcc
accgcacagctcaccaccgcggaccccgaaattgtcgcgcgggtcgaagcggaaggtgtg
gtcgccgttccgtcggctagcgcgcggttacgctactgcctgcaattgcctgccgacgag
ccagtcgccgcccgtgcgtgcgtggtgtgcggcgccgagttcgtcccgttcaccagcgaa
gtccgcacctgtggtcgttcttgcggtggcaaggcacggctccactccgctccggtgccc
gcacccacctgtacgcactgcggtggtccgtcgatcgggctgcggctgtgccagtcgtgc
cggaacgcgatcggcagtgtgcaggctcgactgcgcaccatcggcgtcctcggcgacaaa
cacatccccggcgcctatctgcgggcgtccgaacaacagcgacgcgccctcctcgccgga
ctgctcgacaccgacggcaccgtcacccacggtggctcggtgcagttctcggtgaccagc
gagcggttgttccgcgacgtgcaggaacttgtggtcagcctcggataccgctgccacgtc
gccacgaaacgggttcgtggccggtccgagagctcgtcggtcgcgtacacgatgacgttc
gccaccgacgacgaagtcttcggcctctatcggaaagcgttgttgcacaaggagcggcgg
gccgcgcgcaataccgcacggtcgggcgcacgatacatcgtggatgtccgccggatcgag
agcgtgcccgtgcgctgtgtcgaggtcgacaatgccgagcatctgtatctggcaggccga
tcgatggtgccgacgcacaattccacgctcggcatggatttcatgcggagttgctcgatc
aagcatgggttgccgagcgttatcttctcgctggagatgagccggaccgagatcgtgatg
cgtctgctgtcggcggaggcgaagatcaagctcggtgatatgcgcgcggggcggatgagc
gacgacgactggaccaaactcgcgcggcggatgagcgagatcagcgaagcgccgctgttc
gtcgacgattcaccgaacctcaccatgatggagatccgggccaaagcgcgacggctcaaa
caacgccacgacctgaaactcgtggtggtggactacctccagctgatgacctccggtaaa
aaggtcgaatcccgccagcaggaagtctcggacttctcccgaaacctgaagctgctcgcc
aaggaactcgaagtccccgtggtcgcgatcagtcagctgaaccgcggccccgaacagcgc
accgacaaacgccccatggtgtccgacctccgcgagtccggctgcctacccgcatccacc
cgcattctgcgcgcggacaacggaaccgagagcaccctcggggaactgctggccagcggc
gagcagccactggtgtggtccctggacgagcggatgcgcatggtggcgcgtccgatggtc
aaagtcttccccagcggacgcaaggaagtgttccggctgcgcctcgcctcggggcgggtg
gtcgacgcgaccggtaaccatcccttcctgaccgtcgacggctggatcgctctggaaaag
ctcgccgtcggcgaccgtctcgccaccccacgtcacgtaccggagccggtacacaccaca
cggatgccggacgccaagatcatcctgctggcgcacatgatcggtgacggttcttgcgtc
aagcgccagccgcttcgctacgcgagcatcgatgaagcgaacctcgacgcggtcaccgcg
gccgccacgcacttcggcgtcaccgcagtgcgtgacgaccatccggccgcgcgcgtgtcc
accctgcgcctgcgtgctcccgaacacctcacccacggcaagcggaatccgattgccgca
tggctcgacgagctcggtcttttcggcttgcgcagctacgaaaagttcgtccccaagccg
gttttcgagctcccgaacgatcaggtggcattgttcctgcgccatctgtgggcgaccgac
ggttcggtgcgctgggacgacaccggcggacaggcccgcgtctactattcgtcgacgagc
cgccgcctgatcgacgacgtcgcgcaactgttgcttcgcgtcggtgtccacggtcggatc
aaacaggtccgcaaagccggctatcgggactgctggcatttgaccatcgacggatccgac
aaccagaccgtcttcctgcgcgatgtcggtgtccacggcgcccgcgggcaggccgccgat
gcggcgttgactcatttggcgcccttggcaagcaatacgaatgtcgacaccgtgcccaag
gaagtctggaaccaggttcgcagcctgcttgcgaccaagcagatgacccatcgagaattc
tcggcggccatgggatcccggttctgcggatccacgatgtggaagcgctccccgagtcgt
tctcggctggctcgggtcgccgtcgtcctcgacgatgccgacatcgaaatgctcgccacc
aacgacgtcttctgggacaaagtcgtcgagatcaccagcctcggcgaacaagacgtctac
gacggtaccgtccccggcacccataattttgtggcgcaagggatttcggtccacaacagc
ctcgagcaggacgccgacatggtcatcctgctgcaccgccccgacgcgttcgaacgcgac
gatccgcgcggcggcgaagccgacctcatcctcggcaaacaccgaaacggccccaccgcc
accatcaccgtcgcccaccaactccacctcagccgcttcgtggacatggcccgcggctag
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