Nocardia vulneris: V7968_08265
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Entry
V7968_08265 CDS
T10816
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
nvu Nocardia vulneris
Pathway
nvu00521
Streptomycin biosynthesis
nvu00523
Polyketide sugar unit biosynthesis
nvu00525
Acarbose and validamycin biosynthesis
nvu00541
Biosynthesis of various nucleotide sugars
nvu01055
Biosynthesis of vancomycin group antibiotics
nvu01100
Metabolic pathways
nvu01110
Biosynthesis of secondary metabolites
nvu01250
Biosynthesis of nucleotide sugars
Module
nvu_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
nvu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
V7968_08265 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
V7968_08265 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
V7968_08265 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
V7968_08265 (rfbB)
00525 Acarbose and validamycin biosynthesis
V7968_08265 (rfbB)
Enzymes [BR:
nvu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
V7968_08265 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
NAD_binding_4
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_10
adh_short
NmrA
Sacchrp_dh_NADP
Motif
Other DBs
NCBI-ProteinID:
WWW21058
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All DBs
Position
1782568..1783569
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AA seq
333 aa
AA seq
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MRLLVTGGAGFIGANFVKSTVVDHPDTTVTVLDALTYAGNKASLDEVADRIDFVHGDIAD
LDLVDELVSGVDAVVHFAAESHNDNSLAEPWPFVQTNIVGTYSLLQAVRRYDVRYHHVST
DEVYGDLTAEAPAFTEQTPYNPSSPYSATKAASDLLVRAWTRSFGVRATLSNCSNNYGPY
QHVEKFIPRQITNLIDGVRPRLYGAGHQVRDWIHVDDHNRAVWDVLERGRIGQTYLIGAQ
GELDNKTVVRMLLEAFDRDPDDFDHVTDRPGHDQRYAIDATLLREELGWTPRYGDFRAGL
AATIQWYRDHEAWWRPHKAITERAYVAAGEQTL
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
gtgcgattgcttgtcaccggcggagccggattcatcggggcgaacttcgtcaagtcgact
gttgtcgatcatcccgacaccaccgtgaccgtactggacgcgctgacgtacgccggaaat
aaggcttcactcgacgaagtggccgaccgcattgatttcgtgcacggggatatcgccgat
ctcgacctggtcgacgaactcgtcagcggcgtcgacgcggtggtgcatttcgcggccgaa
tcccacaatgacaactccctcgccgaaccgtggccgttcgtgcagaccaatatcgtcggc
acctattcgctgctgcaggcggttcgccgctacgacgtgcgctaccaccacgtctccacc
gacgaggtctacggcgacctcaccgccgaggcgcccgcgttcaccgagcagaccccgtac
aacccgtccagcccgtactcggccaccaaggccgccagcgatctgctggtccgggcgtgg
acccggtcgttcggcgtgcgcgccacactgtccaactgcagcaacaactatgggccgtat
cagcacgtggagaagttcatcccgcgccagatcaccaacctgatcgacggcgtgcgcccc
cggctctacggcgcggggcatcaggtgcgtgattggatccacgtggacgaccacaaccgc
gcggtctgggatgtgctggagcgcggccgaatcgggcagacctacctcatcggcgcgcag
ggcgaactcgacaacaagacggtcgtgcggatgctcctggaagccttcgaccgcgacccc
gacgatttcgaccacgtcaccgaccgccccggtcacgaccagcgctacgcgatcgacgcg
accctgctgcgcgaggaactcggctggaccccgcgctacggcgacttccgggccggcctc
gccgcgaccatccagtggtaccgcgaccacgaagcctggtggcgtccgcacaaggcgatc
accgagcgggcctacgtcgcggccggcgagcagacgctgtag
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