Nocardia vulneris: V7968_17060
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Entry
V7968_17060 CDS
T10816
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
nvu Nocardia vulneris
Pathway
nvu03030
DNA replication
nvu03430
Mismatch repair
nvu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nvu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
V7968_17060 (holA)
03430 Mismatch repair
V7968_17060 (holA)
03440 Homologous recombination
V7968_17060 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nvu03032
]
V7968_17060 (holA)
03400 DNA repair and recombination proteins [BR:
nvu03400
]
V7968_17060 (holA)
Enzymes [BR:
nvu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
V7968_17060 (holA)
DNA replication proteins [BR:
nvu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
V7968_17060 (holA)
DNA repair and recombination proteins [BR:
nvu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
V7968_17060 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_gamma3
DNA_pol3_delta
Motif
Other DBs
NCBI-ProteinID:
WWW22666
LinkDB
All DBs
Position
3737661..3738629
Genome browser
AA seq
322 aa
AA seq
DB search
MSTPAPLHLVLGDEELLVERAIGTVTAQVRETAPDADAVPVDRMRAGDASTAELAELLSP
SLFAEDRVIILESAAEAGKEAVSVITEAASDPPPGVVLVVLHSGGGRAKALVPALQKAGA
VQHDCAKLTKSAERVEFVRGEFRNAGVRVAGDVVQAMLESIGSDLRELAAACSQLVADTG
GKIDVAAVRQYYSGKAEVSGFDVAELAVAGDRSGAMEALRWANDRGVPHVLLADALADSV
HTIARVGSAGRGDPFKLAQQLGMPPWKVKKAQAQARNWTPATIGSALQVVATLNADVKGG
AADASYALEHALTRILDLHAAN
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgcccgcaccgttgcacctggtgctcggcgatgaagaactgttggtcgaacga
gcgatcggcacggtcaccgcgcaggtgcgggagaccgcgccggacgccgacgccgtgccg
gtcgaccgcatgcgggcgggtgacgcgagcaccgcggaactggccgagctgctgagtccc
tcgctgttcgccgaggaccgggtcatcattttggagtcggcggccgaggcgggcaaggaa
gccgtctccgtgatcaccgaagccgcgagcgatccgccgcccggtgtggtgctcgtggtg
ttgcactcggggggtggccgcgcgaaagcgttggtccccgcgctccagaaagccggtgcc
gtccagcacgattgcgccaaactgaccaagtccgccgaacgagtggagttcgtccgcggc
gagttccgcaacgcgggcgtgcgcgtcgccggtgacgtggtgcaggcgatgttggagtcc
atcggctccgatctgcgcgaactcgccgcggcctgttcgcagctggtcgccgacaccggc
ggcaagatcgatgtcgccgccgtccgccagtactactcgggcaaggccgaggtatccggg
ttcgacgtggcagaactcgccgtcgccggtgaccgttccggcgcgatggaggcgttgcgc
tgggcgaacgatcgcggcgtcccgcacgtgctgctcgccgacgccctcgccgattcggtg
cacaccatcgcccgcgtcggctccgcgggccgcggcgacccgttcaaactggcgcagcag
ctgggcatgccgccgtggaaggtcaaaaaggcgcaggcgcaagcccgcaactggaccccc
gccaccatcggctccgccctccaggtcgtcgcgacactgaacgccgacgtcaaaggtggc
gccgccgacgcgagctacgccctcgaacacgccctcacccgcatcctcgacctacacgcc
gcaaactga
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