Nocardia vulneris: V7968_18100
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Entry
V7968_18100 CDS
T10816
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
nvu Nocardia vulneris
Brite
KEGG Orthology (KO) [BR:
nvu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nvu03021
]
V7968_18100
Transcription machinery [BR:
nvu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
V7968_18100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
HTH_23
MarR_2
HTH_24
HTH_Tnp_4
MarR
KORA
HTH_Crp_2
HTH_3
Trypco1
HTH_31
Sigma70_ECF
HTH_37
Trp_repressor
HTH_Tnp_ISL3
DUF7343
HTH_7
HTH_10
HTH_19
Motif
Other DBs
NCBI-ProteinID:
WWW22853
LinkDB
All DBs
Position
complement(3959392..3960231)
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AA seq
279 aa
AA seq
DB search
MQREFTEAEAGRAPRTHSRGDSYDNIEPWFEKLTALDADDPHRSELREEVMQRCLPLAEH
IARKFAGRGESFDDLHQIARVGLVLAVDRFDVSRGSSFLSFAVPTIMGEVRRHFRDNTWA
VRVPRRLKEIQQQIGPATELLSNRLGRVPTAREIAAELSLDVGTVTQALIASNGYQTRSL
DAVVREDSENAPLPTAAGLGADEPCYRLLEESMTVRPLIAALPERERRVLIMRFFESLTQ
AQIAERLGVSQMQVSRILSKTLDTLREQALAPERSVDVA
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgtgagttcaccgaggctgaggccggccgcgcaccgcgcacacactcccgcggc
gacagctacgacaacatcgagccctggttcgagaagctgaccgcgctcgacgcagacgac
ccgcaccgcagcgaactacgcgaagaagtcatgcagcggtgcctgccgctggccgagcac
atcgcgcgcaagttcgccgggcgcggtgagagcttcgacgatctgcaccagatcgcccgg
gtgggtttggtgctcgcggtggaccgcttcgatgtctcgcgcggcagttcgttcctctcc
ttcgcggttccgacgatcatgggcgaggtgcgcaggcacttccgggacaacacctgggcg
gtgcgagttcctcgtcggctcaaggagattcagcagcagatcggaccggccaccgaactg
ctgtcgaaccggctcggccgggtgccgacggcgcgggagatcgccgccgagttgtccctc
gacgtcggcacggtgacccaggcgttgatcgcgagcaacggctatcagaccaggtcgctg
gatgccgtggtgcgcgaggacagcgagaacgcgccgctgcccaccgccgccgggctcggc
gccgacgaaccgtgctaccggctgctggaggagtcgatgacggtacgtccgctgatcgcc
gcgctacccgagcgcgagcgccgggtgctgatcatgcgcttcttcgaatcgctcacccag
gcacagatcgccgaacggctcggtgtctcgcagatgcaggtgtcacgcattctgtccaaa
accctcgataccctccgcgagcaggccctcgcgccggagcgatcggtggacgtggcctga
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