Nocardia vulneris: V7968_26140
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Entry
V7968_26140 CDS
T10816
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
nvu Nocardia vulneris
Pathway
nvu00260
Glycine, serine and threonine metabolism
nvu00460
Cyanoamino acid metabolism
nvu00630
Glyoxylate and dicarboxylate metabolism
nvu00670
One carbon pool by folate
nvu00680
Methane metabolism
nvu01100
Metabolic pathways
nvu01110
Biosynthesis of secondary metabolites
nvu01120
Microbial metabolism in diverse environments
nvu01200
Carbon metabolism
nvu01230
Biosynthesis of amino acids
nvu01240
Biosynthesis of cofactors
nvu04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
nvu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
V7968_26140 (glyA)
09102 Energy metabolism
00680 Methane metabolism
V7968_26140 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
V7968_26140 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
V7968_26140 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
V7968_26140 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
V7968_26140 (glyA)
Enzymes [BR:
nvu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
V7968_26140 (glyA)
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
WWW16417
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Position
5689536..5690858
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AA seq
440 aa
AA seq
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MADPALRTDLDVPLHEFDPLVAELVGRELGRQQHGLEMIASENYAPLAVMQAQGTVLTNK
YAEGYPGRRYYGGCEHVDELESLALTRLRALFGAEYANVQPHSGAQANAAVMHALLRPGD
RILGLALDHGGHLTHGMKINFSGRLYDVAAYHVRAEDQLIDMAEVARLAREHRPKLIVAG
WSAYPRHLDFAEFRRIADEVGAYLMVDMAHFAGLVAAGLHPSPVPHAHVVTSTTHKTLGG
PRGGFILATAELGKKLDSAVFPGQQGGPLEHVIAAKAVAFKMAAEPAFRDRQERTLTGAR
LLADRLLAEDCRAAGIGLVSGGTDVHLVLVDLRAAELDGKQAEDLLHSVGITVNRNAVPF
DPRPPMVSSGLRIGTPALAARGFDRAAFVEVADIIATALRVGRPWREFSVRVEVLTQKFP
LYAGVHQDLPSATDAARELA
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggcagacccggccctccgcaccgacctcgacgtgccgctgcacgaattcgatccgctc
gtcgccgaattggtcggccgcgaactcggcaggcagcagcacggcctggaaatgatcgcg
tcggagaactacgcacccctggcggtcatgcaggcgcagggcacggtcctgaccaacaag
tatgccgagggctatccgggccgccgctactacggcggatgcgagcacgtcgacgagctg
gaatcgctcgcgctcacccggctgcgcgcgctgttcggcgcggaatacgccaacgtgcaa
ccacattcgggggcgcaggcgaatgcggcggtgatgcacgcgctgctgcgtcccggcgac
cgcatcctcgggctggcactggaccacggtggtcacctcacccacggcatgaagatcaac
ttctccggacggctgtacgacgttgcggcataccatgttcgggccgaagaccagctgatc
gatatggcggaggtggcgcggctcgcgcgcgagcatcggccgaagctgatcgtggcgggc
tggtcggcctatccccggcacctcgatttcgccgagttccggcgcatcgccgacgaggtc
ggcgcgtacctgatggtcgacatggcgcatttcgccggcctggtcgcggccggattgcat
ccctcgcccgtgccgcacgcccacgtggtcacctcgaccacgcacaagaccctgggcggc
ccgcgcggcggattcattctcgccaccgccgaattgggcaagaagctcgattccgcggta
ttccccggccagcagggcgggccgctcgagcacgtgatcgccgcgaaggcggtcgcgttc
aagatggcggccgagccggccttccgcgaccgccaggaacgcaccctgaccggcgcgcgg
ctgctcgcggaccggctgctcgcggaggattgccgcgccgccggtatcggactcgtcagc
ggcggcaccgacgtccacctggtgctggtggatctacgcgccgccgagctggacggcaaa
caggctgaggatctgctgcacagcgtgggaatcacggtgaaccgcaacgccgttccattc
gacccgcgcccgccgatggtcagctccggcctccggatcggcacgcccgcgctggctgcg
cggggcttcgaccgcgcggccttcgtcgaggtcgccgatatcatcgcgacggccctgcgg
gtgggccggccctggcgcgaattcagcgtgcgggtggaggtcttgacgcagaagttcccg
ctctatgccggggtgcaccaggacctcccgtcggccaccgacgccgcgcgggagctcgcg
tga
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