Nocardia vulneris: V7968_41885
Help
Entry
V7968_41885 CDS
T10816
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
nvu Nocardia vulneris
Pathway
nvu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nvu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
V7968_41885 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nvu03019
]
V7968_41885 (recQ)
03400 DNA repair and recombination proteins [BR:
nvu03400
]
V7968_41885 (recQ)
Enzymes [BR:
nvu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
V7968_41885 (recQ)
Messenger RNA biogenesis [BR:
nvu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
V7968_41885 (recQ)
DNA repair and recombination proteins [BR:
nvu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
V7968_41885 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
Helicase_C
RecQ_Zn_bind
Motif
Other DBs
NCBI-ProteinID:
WWW19352
LinkDB
All DBs
Position
complement(9263623..9265494)
Genome browser
AA seq
623 aa
AA seq
DB search
MTPPDAFAAVATDTEPGVDAGSGAAQEVLRRVFGYDSFRGDQREIVEHVVAGGDALVLMP
TGGGKSLCYQVPALVRPGVGVVISPLIALMQDQVDALSALGVRAGFLNSTQYPDERRTVE
AQFVAGELDLLYLAPERLRLESTAQLFDRGKVALFAIDEAHCVSQWGHDFRPDYLALSML
HERWPDVPRIALTATATGKTRDEIVQRLDLGSARRFVASFDRPNIQYRIEPKNKPDRQLL
EFINTEHAGDAGIVYCLSRNSVEKTAAFLTENGIRAVPYHAGLDNRTRAQNQARFLREDG
LVVVATIAFGMGIDKPDVRFVAHLDLPKSVEGYYQETGRAGRDGLPSTAWMVYGLNDVVQ
QRKMIDSSEGDAAHRRQLQLHLDAMLALCETVSCRRVQLLNYFDQPGAACGNCDTCLTPP
ESWDGTVPAQKLLSTVLRLKRERGQSFGAGHIVDILLGKKNPKVLQHDHHELKVFGIGTD
LRDIEWRGVVRQLLAGGLLAVHGDYGVLTLTEASNEVLFDGRQVLLRREPERVTKPARAA
KAGKATVDMAPADVPVFERLREWRAATAKEQGVPAYVVFHDATLREIAARKPSSLTELGS
VGGVGENKLAKYGEGVLEVLAGE
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
gtgactccccccgatgcattcgcggccgtggcgaccgacaccgaacccggtgtggacgcg
ggatccggtgcggcgcaagaggttctacgccgggtcttcggttacgacagcttccgcggc
gatcagcgcgagatcgtggagcacgtcgtcgcgggtggtgacgcgctggtgctcatgccg
accggtggcggtaagtcgctctgttaccaggtccccgcgctggtgcgtccgggcgtcggt
gtggtgatctcaccgctgatcgcgctgatgcaggatcaggtggacgcgctcagcgcgctc
ggcgtgcgcgccggattcttgaactcgacccagtacccggacgagcgtcgcacggtggag
gcccagttcgtcgcgggcgaactcgacctgctgtacctggcaccggagcgattgcggttg
gaatcgacggcacagctgttcgaccggggcaaggtcgcgctgttcgccatcgacgaggcg
cactgtgtctcgcagtggggccacgacttccggcccgactacctcgccctgtcgatgctg
cacgagcgctggccggacgtgccgcgcatcgcgctgaccgcgaccgccaccggcaagacc
cgggacgagatcgtgcagcgcctggacctcggctccgcccgccggttcgtcgccagcttc
gaccggccgaatatccagtaccggatcgaaccgaagaacaagccggatcgtcagctgctg
gaattcatcaacaccgaacacgcgggcgacgcgggcatcgtctactgcctgtcgcgcaat
tccgtggagaagaccgctgccttcctcaccgagaacggtattcgtgcggtgccgtaccac
gccggactggacaaccgcacccgcgcgcagaaccaggcgcgcttcctgcgcgaggacggc
ctggtcgtggtcgccaccattgcgttcggtatgggcatcgacaaaccggatgtgcgcttc
gtcgcgcacctggacctgccgaaatcggtcgagggctactaccaggagaccggccgcgcg
ggccgcgacgggctgccgtccaccgcgtggatggtgtacggcctcaacgatgttgtgcag
caacgcaagatgatcgactcgtccgagggcgacgccgcgcatcggcggcaattgcaactg
cacctggacgcgatgctcgcgctgtgcgagacggtcagctgccgacgggtgcagctgctc
aactacttcgaccagccgggcgcggcgtgtggcaactgcgatacctgcctgacgccgccg
gaatcctgggatggcaccgtcccggcgcagaagctgctgtccacggtgctgcggctgaag
cgggaacgcggccagagcttcggtgcgggccatatcgtcgacatcctgctcggtaagaag
aatcccaaggtgctgcaacacgatcaccacgagctcaaggtgttcgggatcggcaccgat
ctccgcgatatcgaatggcgcggcgtggtgcggcaattgctcgccggtgggctgctcgcg
gtgcacggcgactacggcgtgctgacgctgaccgaagcgagcaacgaggtgctgttcgac
ggacgtcaggtgctgctgcgtcgcgaaccggagcgggtcaccaaaccggcccgtgccgcg
aaggcgggcaaggccacggtcgatatggcgcccgcggatgtgccggtattcgagcggctg
cgcgaatggcgggcggcgaccgccaaggagcagggcgtcccggcctacgtcgtgttccac
gacgccacgctgcgcgagatcgcggcgcgcaaaccgtcgagcctgaccgaactcgggagc
gtgggcggtgtcggcgagaacaagctggccaagtatggcgaaggggtgctcgaggtactg
gccggagagtga
DBGET
integrated database retrieval system
