Nitrosococcus watsonii: Nwat_0469
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Entry
Nwat_0469 CDS
T01266
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
nwa
Nitrosococcus watsonii
Pathway
nwa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nwa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Nwat_0469
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nwa03400
]
Nwat_0469
Enzymes [BR:
nwa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
Nwat_0469
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Nwat_0469
DNA repair and recombination proteins [BR:
nwa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Nwat_0469
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
DNA_ligase_ZBD
C1_2
Zn_ribbon_SprT
DZR
IBR_1
Zn_ribbon_TFIIB
Zn_ribbon_IS1595
Motif
Other DBs
NCBI-ProteinID:
ADJ27434
UniProt:
D8KAB9
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All DBs
Position
complement(489229..490044)
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AA seq
271 aa
AA seq
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MPELPEVETVRRGIEPHLVGRQIHTVIVRESRLRWPIPLFLTQNLIGQSFLAVGRRGKYL
LLNCTQGTIIFHLGMSGSLRLVTNNTPPAKHDHLDILLNSGRCLRFNDPRRFGSVSWTQA
NPVHHPLLEILGPEPLESLFDGHYLFKHSRHRRAPVKVFIMNHRIVVGIGNIYANEALFL
AGIHPRRSAGRIGLARYQRLADTIKTVLDNAIQAGGTTLRNFLTSDGKPGYFVHQLQIYN
RNAHPCPVCGTPIRLERIGQRASYYCPRCQH
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgaattaccagaggttgaaaccgttcgtcgcggcatcgaaccacacctcgtaggc
cgccaaatacatacagttattgtccgagagtcccgtctacgctggccaattccgctcttc
ttaacccagaatcttattggccagtcctttctcgctgtaggacgccgtggcaaatacctc
cttttgaattgtacccagggtacgattatttttcacctcggtatgtctggaagtctacgc
ctggtcacaaataatacaccgcctgcaaaacatgatcatcttgatatcctattgaatagc
ggccgttgtttgcgtttcaacgatccccgccgatttggatcagtatcctggactcaagcg
aaccccgtgcatcaccctctgctggagatacttgggccagaacccttagaatctctattt
gatggacattatctttttaaacactcccgccataggcgagccccggttaaagtctttatc
atgaaccaccggatagtagttgggattggaaatatttatgctaatgaagcactgtttctg
gcagggattcatccccggcgatccgctggccgcatcggtttagcccgctaccaacggcta
gcagacactattaagacagtgctagataatgcaattcaggcgggaggaactacattgcgg
aactttttaactagcgatggtaaacccggctatttcgttcatcagctccaaatttacaat
cgtaacgcccatccttgcccggtttgcggaactcctattcgccttgaacgcattggccaa
cgggcaagctattactgtccccgctgtcagcattaa
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