KEGG   Nitrosococcus watsonii: Nwat_0529
Entry
Nwat_0529         CDS       T01266                                 
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
nwa  Nitrosococcus watsonii
Pathway
nwa02024  Quorum sensing
nwa03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:nwa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Nwat_0529
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Nwat_0529
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nwa03019]
    Nwat_0529
   03036 Chromosome and associated proteins [BR:nwa03036]
    Nwat_0529
Messenger RNA biogenesis [BR:nwa03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     Nwat_0529
Chromosome and associated proteins [BR:nwa03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    Nwat_0529
SSDB
Motif
Pfam: Hfq LSM Hfq_1
Other DBs
NCBI-ProteinID: ADJ27492
UniProt: D8KAH7
LinkDB
Position
548466..548738
AA seq 90 aa
MSRGQSLQDPFLNALRKERVPVSIYLVNGIKLQGQIESFDQFVVLLKNSVSQMVYKHAIS
TVVPARNVKLSSNEGENIHPIGGTRSADVD
NT seq 273 nt   +upstreamnt  +downstreamnt
atgtcacgtgggcagtcgttacaagacccatttcttaatgccttgcgtaaggagcgagtt
ccagtctcgatatatcttgttaatggaattaaattacaggggcagattgagtcttttgat
caatttgttgttttgttgaaaaattctgttagccaaatggtatacaaacatgctatctct
acggtcgttcccgcacgcaacgttaaattatctagcaatgagggagaaaatattcatcct
attggaggaacgcgttctgctgatgtcgattag

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