Nitrosococcus watsonii: Nwat_0529
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Entry
Nwat_0529 CDS
T01266
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
nwa
Nitrosococcus watsonii
Pathway
nwa02024
Quorum sensing
nwa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nwa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Nwat_0529
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Nwat_0529
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nwa03019
]
Nwat_0529
03036 Chromosome and associated proteins [BR:
nwa03036
]
Nwat_0529
Messenger RNA biogenesis [BR:
nwa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Nwat_0529
Chromosome and associated proteins [BR:
nwa03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
Nwat_0529
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
Motif
Other DBs
NCBI-ProteinID:
ADJ27492
UniProt:
D8KAH7
LinkDB
All DBs
Position
548466..548738
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AA seq
90 aa
AA seq
DB search
MSRGQSLQDPFLNALRKERVPVSIYLVNGIKLQGQIESFDQFVVLLKNSVSQMVYKHAIS
TVVPARNVKLSSNEGENIHPIGGTRSADVD
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgtgggcagtcgttacaagacccatttcttaatgccttgcgtaaggagcgagtt
ccagtctcgatatatcttgttaatggaattaaattacaggggcagattgagtcttttgat
caatttgttgttttgttgaaaaattctgttagccaaatggtatacaaacatgctatctct
acggtcgttcccgcacgcaacgttaaattatctagcaatgagggagaaaatattcatcct
attggaggaacgcgttctgctgatgtcgattag
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