Nitrosococcus watsonii: Nwat_1185
Help
Entry
Nwat_1185 CDS
T01266
Name
(GenBank) ATP-dependent helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
nwa
Nitrosococcus watsonii
Brite
KEGG Orthology (KO) [BR:
nwa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nwa03019
]
Nwat_1185
Enzymes [BR:
nwa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
Nwat_1185
Messenger RNA biogenesis [BR:
nwa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Nwat_1185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
DEAD
AAA_19
HA2_N
AAA_22
NACHT
nSTAND3
AAA_25
ResIII
T2SSE
TsaE
ABC_tran
AAA_23
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
ADJ28118
UniProt:
D8K5E1
LinkDB
All DBs
Position
complement(1271032..1274937)
Genome browser
AA seq
1301 aa
AA seq
DB search
MGSIILQPQLEILASKIPSCMQRDQHRLKRRLQRLTKGNSSHNLDRLTQAIEDSRLWREQ
RQNQLPKPAFEQSLPVVERREEIGTAIRNHQVVILCGETGSGKTTQLPKICLELGRGVAG
MIGHTQPRRIAARTVANRIAKELNSDMGQIVGYKVRFHDQVGPSTYIKLMTDGILLAETQ
GDRFLDQYDTLIIDEAHERSLNIDFLLGYLKQLLPKRPDLKVIITSATIDTERFSQHFSQ
APIIEISGRTYPVEIRYRPLCGEQATQERNLSEGILDAVDQLSRLGPGDILVFLPGEREI
RETAEALRKHHPPHTEILPLYARLSSAEQNRVFKPHSGRRIVLATNVAETSLTVPGIHYV
VDPGLARLSRYSVRSKVQRLPIEKISQSSANQRAGRCGRIATGVCIRLYSEEDFLDRPEF
TDPEILRTNLASVILQMKSLQLGAVEDFPFLDPPLPKMINDGLRLLAELGAIDKTHNLTP
IGQRLTQLPIDPRIGRMVLAGGEFHCLREILIIASALSIQDPRERPLDAQQAADEAHSRF
QDERSDFLSYLKLWEDLQRQWGRLSQNKLRAYCREHFLSYLRLREWRDIHQQLKLLATQL
GFRPNQVAAEYEAIHRALLTGLLGNIAAKSEKNHYLGARNIKLQIFPGSALFKKSPKWIM
AAELVETSQLYARCTSKIEPEWLEPLALHLVKRSYFDPHWEKRPAQVIAYERITLYGLTV
IPKRRIHYGPIHPEEAREIFIREALVNGDYDTQAPFFRHNQKLVAEIEELEHKSRRRDVL
IDEQSLYQFYEERLPAGIYNGTGFKQWRQQAEKKNPRLLFLSREELMRHDAKEITGTRFP
DQITVKGFPLTLSYHFEPGHPADGVTLTVPLAVLNQLEANRFQWLVPGLLKEKIICLIKA
LPKSLRRNFVPVPDFAEACMRALSPAQGPLLDKLARHLQIMTGVPLSATCWQEIELPRHL
QMNFRLVDEKDKELATGRDLTILQQQWASKAQRSFRGWDNNELTREGITQWDFGELPEQI
ELERQGLKLKGYPALQDTGTAVSLVIMDSAETAQELTCLGLRRLFMLVLTQQIKYLRKNL
PGIQKMCLHYTGLPAMPWGGNTPSQSSCESLKDALIQGVIDRTFILDRPPIRNKQAFMAR
KEKGCAELMATANKLCHLVEEILAEYHEAAKQLKGNLPLVWLTSIRDMKEQLAHLVYHGF
INQTPPAWLSHLPRYLKGIRLRLAKLQANPHRDQQRQAEITPLWQAYEKRMAIQHQENGP
SPALETYRWLLEEYRISLFAQELGTKHPVSPKRLAAQWQEV
NT seq
3906 nt
NT seq
+upstream
nt +downstream
nt
atgggttccattatcttgcagccgcaactagaaatattagcctcgaaaattccctcctgc
atgcagcgcgatcaacatcggctaaaacggcgcctgcaacgactcactaaaggaaattca
agccacaatttagaccgcctaacccaagccatcgaagattcccgcctgtggcgggaacag
cgccaaaatcaattacctaaaccagcttttgagcaatccttgccagtcgttgaacggcgg
gaggaaatcgggacagctatccgtaatcatcaagtggttattctatgtggcgagacgggt
tctggaaaaactacccaattgcccaaaatatgcttagaactgggacggggcgttgcgggc
atgattggccatacccaaccgcgccgaatcgcggcccgtactgtggccaaccgaattgcc
aaagaactcaacagtgatatggggcaaatcgtaggctataaagtgcgtttccatgatcag
gttggccctagtacctatattaagcttatgaccgacggtattctcttggctgaaactcag
ggagaccgctttctagaccaatacgatactctcattatcgatgaagcccatgagcgcagt
ctcaatattgattttttgctgggctatctcaagcaactgctgccgaaacggcctgatctc
aaggttattatcacctctgccacgattgataccgaacgcttttctcagcatttcagccaa
gcgcccattatcgaaatttccgggcgcacttatccggtagagatccgctatcgtcccctt
tgtggcgaacaagcaacccaggagcggaatttatccgagggtattctagatgcggtggat
caactgtcccgtctgggtccgggggatattttggtttttctccctggggagcgggaaatc
cgcgagactgccgaggccctgcgcaaacaccatcccccccacactgaaatcctgcccctt
tatgcccggctttcctccgccgagcagaatcgggttttcaaaccccattcaggaagacgc
atcgtgctagcaaccaatgttgcggaaacctccttaaccgtaccaggcattcattacgtc
gtggatccggggttggcccgtctgagccgctacagcgtgcgcagcaaggtgcaacgcttg
cctatcgaaaaaatttcccaatccagcgctaatcagcgggcaggccgttgtggccgcatt
gcgacaggggtttgcatccgcctctatagcgaagaagacttcctcgaccggcctgaattt
accgatccggaaatcctccgaaccaatctggcatcggttattctgcaaatgaaatctttg
cagttaggagcggtggaagattttccctttctcgatccccctctccccaaaatgattaat
gatggtctgcggctactagctgaattaggggctatagacaagacccataatttaacccct
ataggccaaaggctgacgcaacttcccattgaccctcgtattggccgcatggtgttggca
ggtggtgaatttcattgccttagggaaatacttatcatcgccagcgccctcagtatccag
gacccccgggaacgcccccttgacgcccagcaagccgccgatgaagcccattccaggttt
caggatgagcgctctgattttctctcttatctaaaactatgggaggacttgcaacgccaa
tggggacgcctttcccagaataaactccgggcttactgccgggagcattttctttcctac
ttgcgccttcgggaatggcgcgatatccaccaacaactcaaactactggccacccaactt
ggctttcgtcccaatcaggtggcagcggaatacgaggctattcatcgggcgctgctcacg
ggactgctgggcaatatcgctgctaaatcagaaaaaaatcactatctgggcgcaagaaat
attaagctccagatcttccccggatctgccctctttaaaaaaagccccaagtggatcatg
gcggcggaattggtggaaacctcccagctttatgcccgctgcaccagtaagattgagcct
gaatggcttgaacctcttgccctccatctcgttaaacgcagttattttgacccccattgg
gagaaacgccctgcccaggtaatagcctatgaacggatcaccctttacggtcttacggtg
atccctaagcgccggattcattatggtcccattcatcccgaagaggcgcgggaaatcttt
attcgcgaggccctggttaatggcgactatgatacccaggcccccttcttccgccataat
cagaaattggtagcagaaatagaagaactagagcacaaaagccggcgacgggatgtgctt
attgatgagcagagcctctatcaattctatgaggagcggcttccagcggggatctacaac
ggcactggctttaagcagtggcgccaacaggcggagaaaaaaaatccccggctattattc
ctcagccgggaagaattgatgcgtcatgatgcaaaagagataacaggaacgcgttttccc
gatcaaataaccgtaaaaggtttcccccttaccttgtcctatcactttgaaccgggccat
cctgcggatggagtaacgctaaccgtccccctcgccgtgctcaatcaattggaagcaaac
cgttttcaatggctagtcccagggctgcttaaagaaaaaattatttgtctgattaaagcc
ctacctaagagtttacgccgtaatttcgtgcccgtgcctgattttgcagaggcttgtatg
cgcgctttatctcccgcacaaggcccgttgctagacaagctagctcgccacctccaaatc
atgacgggagtccccctctccgctacttgctggcaagaaatagagctgccacgccatctg
caaatgaatttccggctagtggatgaaaaggataaagagctggctaccggcagggatttg
accatcctacagcaacagtgggccagcaaagcccagcgcagctttcggggctgggataat
aacgaactgacccgtgaagggatcacccaatgggattttggcgaactaccagaacagatt
gaattagaacgccaggggcttaaactcaagggttatcctgcattgcaggatacaggaacc
gcggtttccctggtcattatggattcagccgagacggcgcaggaactcacctgcttggga
ttacggcgtctgtttatgctggtattgactcagcaaattaaatatttaagaaaaaatctg
ccaggcattcagaaaatgtgcttgcactatacgggcctcccagccatgccgtgggggggc
aataccccttcccaatcctcttgcgaaagcctcaaggatgccttgattcagggagtcata
gaccgcacttttattcttgaccgccctcccattcgcaataagcaagcatttatggcccgt
aaggaaaaaggctgcgctgaactcatggccaccgccaataaactctgtcatctcgtggag
gaaatcctggctgaatatcacgaggccgccaagcagctaaagggcaatcttccccttgta
tggctaacctccattcgtgacatgaaggaacaactagcccatttggtctatcatggtttt
attaaccagacaccgccagcatggcttagtcatcttccccgctatctcaaagggataagg
ctacgacttgcaaaactgcaggcaaacccccaccgagatcagcaacgacaagcagaaatt
acccctttatggcaagcttatgagaaaagaatggcaatacagcaccaggaaaacggacca
tctccagccttggaaacctatcgctggctactggaagagtacaggatctccctttttgcc
caggaactagggaccaagcacccagtctcccctaagcggttagccgctcaatggcaagag
gtttaa
DBGET
integrated database retrieval system
