Nitrosococcus watsonii: Nwat_1424
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Entry
Nwat_1424 CDS
T01266
Name
(GenBank) RNA polymerase, sigma 70 subunit, RpoD subfamily
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
nwa
Nitrosococcus watsonii
Brite
KEGG Orthology (KO) [BR:
nwa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nwa03021
]
Nwat_1424
Transcription machinery [BR:
nwa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Nwat_1424
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
Sigma70_r4_2
FlgN
Motif
Other DBs
NCBI-ProteinID:
ADJ28334
UniProt:
D8K607
LinkDB
All DBs
Position
complement(1557367..1558278)
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AA seq
303 aa
AA seq
DB search
MVSERISPLQSINITATLARNKKTANSVNRSLSPGLTLENLYMREAGKVPLLNAEEERYY
ARLALQGDREARNRIIESNLRIVIKVASRHVNRGLPLMDLIEEGNLGLINAVEKFNPELG
FRFSTYASWWIRQAIERALMNQTRTIRLPVHVFKKIRSYQKEVILFRQRYNIEPRSGEIA
KLLHEPLERVQRYLSLQALETSLDDPLNEDTEDCLADLLPDERNNPALLWEIFDKKASIY
NQLSQLPERQQEILKRRYGLDGYEVTTLEEIGHNLGITRERVRQIQQAAIKRLRKIIESE
FAT
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggttagcgaaagaatttcccctctccaatcaattaacatcactgccacattagcacgt
aataaaaagaccgcaaatagcgttaataggtctttatctccggggcttaccctggagaat
ctttatatgcgagaggctggtaaagtacctttattgaacgctgaggaagaaagatattat
gcacggttagccctgcaaggggaccgcgaagcccgaaatcgcatcattgaaagtaatctg
cgaatagtcataaaagttgccagtcgccatgttaatcgcggtctgcctttaatggatttg
attgaagaaggcaatcttgggcttattaatgcggtagagaaatttaatcctgaacttggt
ttccgattttctacgtatgctagttggtggatacgccaggcaatagaacgggcgctcatg
aatcaaacccgaactattcggctccctgtgcatgtttttaaaaagattcgttcttatcag
aaggaggtgattttattcaggcagagatataatattgaaccccgttcaggggagattgca
aaattgcttcacgaacccttggaaagggtacagcgttatcttagcttgcaggcactagaa
acatcgctggatgatcctctgaacgaggacactgaagactgtctggctgatctacttcct
gacgaaaggaacaacccggctcttctgtgggagattttcgataaaaaggccagtatttat
aaccaattatcgcaactccctgagcgtcaacaggaaattctcaaacgccgctacggattg
gatggctatgaagtgaccacacttgaggaaataggccataaccttggtattactcgtgaa
cgagtacggcaaattcagcaagcagcgatcaaacggcttcgtaagattattgaaagcgag
tttgcaacataa
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