Nitrosococcus watsonii: Nwat_1835
Help
Entry
Nwat_1835 CDS
T01266
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
nwa
Nitrosococcus watsonii
Pathway
nwa03410
Base excision repair
nwa03430
Mismatch repair
nwa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nwa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Nwat_1835
03430 Mismatch repair
Nwat_1835
03440 Homologous recombination
Nwat_1835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nwa03400
]
Nwat_1835
DNA repair and recombination proteins [BR:
nwa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Nwat_1835
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Nwat_1835
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Nwat_1835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
ADJ28686
UniProt:
D8K709
LinkDB
All DBs
Position
complement(2022385..2024109)
Genome browser
AA seq
574 aa
AA seq
DB search
MAEKVLKQRPVNELEWPEAIHPVLRRVYGARGIKAPDELDYTLERLPSPWLLSNIKTAVT
LLRKALARDWRILVVADFDADGATSCAVAVRALRLMGAHKVDYLVPNRFIHGYGLTPAIV
AEAVAQGQPDLIITVDNGISSLDGVQAARAANIRVLITDHHLPGASLPAANAIVNPNLPN
DPFPSSCLAGVGVIFYVMLALRAHLREQGWFAHRDEQEPALAPLLDLVALGTVADVVPLD
QINRILVAQGLARIRQSRCCAGIQALVACARRPLETLATSDLGFAVGPRLNAAGRLEDMS
LGIACLLTDSLELAQQQANQLDRLNRERREIESTMQAQAVTHLENLVFQGEEKEPLGYCL
FDECWHQGVIGLLAARIRERVYRPVIAFAPHDSEELKGSARSIPGLHIRDALDRVATCYP
DLLTKFGGHAMAAGLSLRRGHLEPFRVAFLEVLETLLDKEALEDVILSDGNLEQWDLEMA
ETLRDGGPWGQGFPEPLFDGVFRVAGFRIVGEAHLKLMLATLDGQQQLEGIAFRCLPPDG
FAPGVKIRLAYRLDVNIYRGSRTAQLMVEHLEVI
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atggcggagaaggttctcaaacagcggcccgttaacgagcttgaatggccagaggcaatc
catccagtattacgccgggtatatggtgcgcgagggatcaaagctccggatgagcttgac
tataccctggagcgtttaccttccccttggttgctgagcaatatcaaaacagccgtgacc
ttattaaggaaggccctagcgcgggattggcggattttggtagtcgctgattttgatgcg
gatggcgccactagctgcgcggtggcggtgcgggcgcttcgcttaatgggtgctcataaa
gtagattatctggtccccaaccgttttatccacggctatggccttacccctgccattgtg
gcggaagcggtagcccaaggccagccagatctcattattaccgtggacaatgggatatcc
agtcttgacggggtacaagcggcgcgggcggccaatattcgcgtgcttatcacggatcac
cacttgcccggagcatccctgccagccgcgaatgctatcgtcaaccctaatcttcccaat
gatcctttccccagttcttgccttgcaggggtgggcgttattttttatgtcatgctagct
ttacgtgcccacctaagggagcaaggctggttcgcccacagagatgagcaagaaccagcg
cttgcccccttgctggacttggttgcgcttggcacggtcgctgatgtcgtgccgctggat
cagattaatcgaatcttggttgcccaaggactggcccggattcggcagagtcgctgctgc
gctggtattcaggcgctcgtggcttgtgcccgacgccctcttgagaccttggccaccagc
gatctgggttttgcggtagggccacggctcaatgctgcagggcgtttggaggatatgagc
cttggtatcgcttgtttattaaccgattccctggagctggcgcagcaacaggccaatcaa
cttgataggcttaaccgtgaacggcgagagattgagtcgactatgcaagcacaagcagtg
actcacctggaaaatttagtttttcaaggggaagagaaggagcccctagggtactgttta
tttgatgaatgctggcatcagggcgtaatcggtttgctcgctgctcgaattcgggaaagg
gtctatcgcccggtaattgcttttgccccccatgatagcgaggagttgaagggatcggcc
cgttccattccggggcttcatattcgggatgccttggatagagtagcaacttgctatccc
gatttgctgactaaatttggtggccatgcgatggctgccggtttaagtttgcggcggggc
catctagagcccttccgcgttgcttttttggaggtactggaaactctgcttgataaggaa
gccttagaggatgttattctcagcgatggcaacttagaacagtgggatctagaaatggcg
gaaaccttgcgggatggaggcccttgggggcagggatttccggagcccttgtttgatggg
gtatttcgggtagcaggatttcgtattgtgggcgaagctcaccttaagctgatgctggct
acgcttgatggccagcagcaattggaagggattgcctttcgttgccttccacctgatgga
ttcgcgcctggcgtaaaaataaggcttgcttatcggttggatgtcaatatataccgaggt
tcgcggacggcgcaattgatggtggaacatttagaggtgatttaa
DBGET
integrated database retrieval system
