Nitrosococcus watsonii: Nwat_1880
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Entry
Nwat_1880 CDS
T01266
Name
(GenBank) excinuclease ABC, B subunit
KO
K03702
excinuclease ABC subunit B
Organism
nwa
Nitrosococcus watsonii
Pathway
nwa03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nwa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Nwat_1880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nwa03400
]
Nwat_1880
DNA repair and recombination proteins [BR:
nwa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Nwat_1880
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Nwat_1880
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
UVR
ResIII
DEAD
AAA_30
UB2H
AAA_22
PolyA_pol_RNAbd
HEM4
DUF87
Motif
Other DBs
NCBI-ProteinID:
ADJ28729
UniProt:
D8K752
LinkDB
All DBs
Position
complement(2065405..2067510)
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AA seq
701 aa
AA seq
DB search
MKGVFQLVSDYQPAGDQPKAIARLTEGLAAGEMYQTLLGVTGSGKTFTIANMIQQVQRPT
IVLAPNKTLAAQLYSEMREFFPHNAVGYFVSYYDYYQPEAYVPASDTYIGKDASVNDHIE
QMRLSATKAFLERPDAIVVASVSAIYGLGDKDSYLNMVLHLMVGDTVDHRGILRRLAELQ
YQRNDTELRRGTYRVRGEIIDIYPAESEQEAIRVELFDDEIESLSYFDPLTGEVLHQVSR
LTVYPKTHYVTPREVLLQAVDEIKIELAERLEQLYGVNKLVEAQRLEQRTCFDIEMILEL
GYCAGIENYSRFLSRRQPGEAPPTLFDYLPKNALLVIDESHVTVPQLGAMYRGDRARKET
LVEYGFRLPSALDNRPLKFEEWEQLAPQIIFVSATPGPYEQQRSGAVIEQVVRPTGLVDP
AVEVRPAGSQVDDLLSEIRQRAAANERVLVTVLTKRMAEDLTQYLEQHEVRVRYLHSDID
TVERVEIIRDLRLGKFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTIGR
AARNLHGRAILYGDTVTGSMGRAIAETERRRKKQLAFNETHRIIPRGIQKAVREIIDGVY
TPSPGKGGRHSPDQVEEKAAEYTRLPPQQLAKRLQQLERQMHKHAQNLEFEQAARLRDEI
KKIKGWVFNGGDSISAPRRGEFSSGGNLIGEDKRRPLRNRV
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
gtgaagggcgtatttcaactggtaagcgactatcagccggcaggcgaccagccgaaggcg
atagcgcggctgacggaaggtctagcggctggggaaatgtatcagactctgctgggggtg
accggatcaggtaaaaccttcaccatagccaatatgattcagcaggttcagcgaccgact
attgtgttagcgcctaataagactctagcggcccaactctatagcgagatgcgggaattt
ttccctcacaatgcagtgggttacttcgtttcttactatgattattaccaaccagaggcc
tatgtgccagcttctgatacttatattgggaaagacgcttcggttaacgatcatatagag
caaatgcggctttccgcaactaaagcatttctggaacggcccgatgccattgtggtggca
agcgtctccgctatctacggtcttggcgataaggatagttatctgaatatggtactgcac
cttatggtgggtgatacggtagaccatcggggaatattgcgccgcttggcggagttgcag
tatcagcgcaatgatacggaactgcgccggggcacttaccgggtacggggagaaattatt
gatatctaccctgccgaatcggagcaagaggctatccgggtagagctttttgacgatgag
atagaaagtctctcttattttgatcccttaacaggtgaagtactgcaccaggtttcccgc
ttgactgtttatccaaagacccactatgtgactccccgggaagtcctgctgcaagcagtt
gatgaaattaagattgagcttgctgagcgattggaacagctttatggcgttaataaatta
gttgaagcccagcgcctggagcaacggacctgctttgatatcgagatgatattagagcta
ggttactgtgcggggattgaaaattattcccgtttcctatctcggaggcagcctggggaa
gcgccgccaaccctgtttgattatctccccaagaatgctttgctggttattgatgaaagc
catgtgacagtgccccaattgggcgctatgtaccggggtgatcgagcccgtaaagagacc
ttggttgagtacggtttccgcttaccttcagccttggataaccggcctttaaaatttgag
gaatgggaacagttagcaccccagattatttttgtttcagctacgcctggaccctatgaa
cagcagcgttcgggggccgtgattgagcaagtagtacgtcctacgggtctggttgatccg
gcggtagaggtaaggcccgctggtagtcaggtggatgatctgctttcggaaatccgccag
cgagcggcggcaaatgagcgggtattggtaacggtccttaccaagcgtatggcagaggat
ctgactcagtatctggaacagcatgaggttcgtgtgcgctacctccattcggacattgat
acggtagaacgggtagaaattatccgtgatctgcgtttaggtaagtttgatgtgttggtg
ggaatcaacttgctgcgggaaggattagatattccagaagtgtctttggtggccatcctg
gatgcggacaaggaaggttttctccgctcggagcggtcgctcattcagactataggacgg
gctgcgcgcaatttacatggaagagccattctttatggggatacggtcacaggctctatg
ggccgggccattgccgagacagaaagacggcggaaaaaacagcttgcctttaatgaaacc
catcgtattattcctcgtgggatacaaaaagcggtgcgggaaatcattgatggtgtttat
acgccaagccctggtaaaggaggccgccactcccctgaccaggtggaggagaaagccgcc
gaatatacacgcttgccgccccagcaattggctaaacgtctacaacaactagagcggcag
atgcacaagcatgctcagaatttagagtttgaacaagccgcccggttgcgcgatgaaatc
aaaaagattaagggctgggtctttaacggaggcgattccatctctgctccgaggcggggg
gaattctcaagcgggggcaatttgataggggaagataaacgccgcccgttgcgaaaccga
gtatga
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