Nitrosococcus watsonii: Nwat_2013
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Entry
Nwat_2013 CDS
T01266
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
nwa
Nitrosococcus watsonii
Brite
KEGG Orthology (KO) [BR:
nwa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nwa03016
]
Nwat_2013
Enzymes [BR:
nwa01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
Nwat_2013
Transfer RNA biogenesis [BR:
nwa03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Nwat_2013
Prokaryotic type
Nwat_2013
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
ADJ28847
UniProt:
D8K7H0
LinkDB
All DBs
Position
complement(2199741..2200520)
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AA seq
259 aa
AA seq
DB search
MRIALGLEYDGSNFSGWQSQKGVRTVQATLERALSTVANEPVTVITAGRTDAGVHAAAQV
VHFDTTTFRLEHHWVFGGNANLPPEVAILWAQPVNEAFHARFSAIARHYRYIVLNRRTRP
AIANRRVTWYCQPLSVTKMKEAGAFLVGEHDFSSFRAKACQAKSPVRNVHHLEVTRQGDW
IIMDISANAFLHHMVRNIAGVLMAIGKGEQPPRWAEEVLQARCRAVGGVTARPDGLYLVS
VDYPDHFGLPKLSCPVTVW
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgagaatcgcgcttggtcttgagtatgatggctccaatttttccgggtggcagtcccaa
aagggcgtgcgtacagtccaggctactttggagcgggctctttccacggtagctaatgag
ccggttactgtcatcactgcggggcgtaccgatgcgggggtgcatgccgcggcccaggtg
gttcattttgacactaccactttccgtttagagcaccattgggtttttggcggcaatgct
aatctgccgccggaggtggccattttatgggcgcaaccggtgaacgaggcttttcatgcc
cgcttttcggcgatagcgcggcactatcgatatatcgtccttaaccgcaggacgcgccca
gctatcgcgaatcgccgcgtgacgtggtattgtcagcctttatccgttactaagatgaag
gaagcgggtgcttttctggtgggcgaacatgatttttcttcctttcgagctaaggcttgc
caggccaagagccctgtcagaaacgtccatcatttagaggtgacacggcaaggggattgg
atcatcatggatatctcggccaatgcttttttgcaccatatggtgcgtaatattgccggg
gtactcatggcgataggaaagggagaacaaccgccgcgctgggcggaggaggtattacag
gcgcgatgccgtgctgtgggaggtgtgactgctcgtcccgatggtttgtacttggtgagc
gtggattaccccgatcactttggtttacccaaactttcctgtcccgtcacggtttggtaa
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