Nitrosococcus watsonii: Nwat_3078
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Entry
Nwat_3078 CDS
T01266
Name
(GenBank) excinuclease ABC, A subunit
KO
K03701
excinuclease ABC subunit A
Organism
nwa
Nitrosococcus watsonii
Pathway
nwa03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nwa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Nwat_3078
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nwa03400
]
Nwat_3078
DNA repair and recombination proteins [BR:
nwa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Nwat_3078
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Nwat_3078
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_16
AAA_21
AAA_23
nSTAND1
AAA_22
RsgA_GTPase
AAA_25
nSTAND3
DnaJ_CXXCXGXG
Viral_helicase1
cobW
BCA_ABC_TP_C
ScfRs
ABC_ATPase
Motif
Other DBs
NCBI-ProteinID:
ADJ29797
UniProt:
D8K4J5
LinkDB
All DBs
Position
complement(3267641..3270514)
Genome browser
AA seq
957 aa
AA seq
DB search
MNRICIRGARTHNLKNIDLDLPRERLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSLMEKPDVDHMEGLSPAIAIEQKSTSHNPRSTVGTITEIYDYLRLLYARAGEPRC
PEHGIILAAQTVSQMVDQVLGLPKGGRYMLLAPIVEGRKGEHLQVLENLLRRGFIRARID
GEVVELEQAPQLDGNKKHTIEAVVDRFKVRPDLQLRLAESFETALQLSDGLARVASLEDS
ALAEQVFSAHLACPVCRYSLSELEPRLFSFNNPKGACPSCEGLGVKPFFDSSRVVAHPEL
SLAAGAIRDWDRRNAYYYQMILSLARHYGFEVDLPFQDLPEAVRRVVLYGSGQEKITFHY
LDSQDKQTIRRHAFEGVIPNMERHYRETETSAVREELARYLAVQVCPACQGTRLRQEACH
VFVADYSLPEITALPVGEAQSLFSQLCLPGRRGAIANPILKEIQDRLAFLINVGLGYLTL
NRRAETLSGGEAQRIRLASQIGAGLVGVMYILDEPSIGLHQRDHQRLLETLIRLRDLGNT
VIVVEHDEEAIRAADQVIDMGPGAGRHGGEIVAQGTPLEIMANPASLTGQYLKGQQEIPM
PCQRVPFNTSRLLSLRGAHGNNLDQVDLDIPLGAMTCITGVSGSGKSTLINDTLLRAATR
ILHRASVEAAPYESIEGLEHLDKVIAIDQNPIGRTPRSNPATYTGFFASIRSLFAGTHEA
RSRGYGPGRFSFNVKGGRCESCQGDGLIKVEMHFLPDLYVACDVCQGKRYNRETLEIRYK
GKNIDEILAMTVEEAQDFFANVPAVARKLLTLLEVGLSYITLGQNAVTLSGGEAQRIKLA
KELARRDTGRTLYILDEPTTGLHFHDIAQLLQVLLRLRDGGNTIVIIEHHLDVIKTADWL
VDLGPEGGERGGRIIATGAPETVAACQDSYTGRYLARILPKAKRGQSPVQQSHDRAF
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgaatcggatttgcatccgtggggcgcggacccataatttgaagaacattgatctggat
ctgcccagggaacggttaatcgttattaccgggctgtcgggttcaggaaagtcatctctg
gcttttgatacgctttatgctgaagggcagcgccgttatgtagagtctctctcggcctat
gctcgccagtttctctcccttatggaaaagcccgatgtggatcatatggaagggctttcc
ccggccattgccatcgagcaaaaatccacttcccataatccccgctccaccgtcggcacc
atcaccgaaatctacgattatttgcgcttgctctatgcccgcgccggcgagccccgttgc
ccagagcatgggattatcctggcggcccagacggtgagtcaaatggtggatcaggttttg
ggccttccgaaaggagggcgatacatgttgctggcgccgatagtcgaagggcgcaaggga
gagcatctgcaagtgctggagaatctgctgaggcgaggctttatccgggccaggattgat
ggtgaagtggtagagctggagcaagcgcctcaacttgatggtaataaaaaacatactatc
gaggcggtggtggatcgtttcaaggttcgccctgatctccaattgcgcctggcggagtct
ttcgagacggccctacagttatctgatggcttggctcgggtagcttccctggaggattcg
gccctagcggagcaagtgttttccgcccacttggcttgccccgtttgccgctattcttta
agtgaattggaaccccggttattttcctttaataaccccaagggcgcttgtcctagttgc
gaggggctgggtgtaaagccgttttttgattcctcccgggtggtggcccatcctgagttg
agtttggctgcgggcgccattcgggactgggatcggcgcaatgcttattactaccagatg
attctttccctggcccgacactatggctttgaggtagacctccctttccaagatttgccc
gaagcagtacgcagggtagtactttacggcagtggccaggaaaaaattacctttcattat
ctcgatagccaagacaagcagactatccgccgccatgctttcgaaggggtgattcccaat
atggagcgccattaccgggagaccgagacctcggcggtgcgagaagaattggctcgctat
ttagccgtgcaggtttgcccggcatgccagggtacccggctacgccaggaggcgtgccat
gtattcgtggcggattatagtctgcctgaaatcaccgccttgcctgtaggggaggcgcag
agcttgttttcccagctatgtttaccgggtcgccgaggggccattgcaaacccaatcctt
aaggagatacaagaccggctagctttcttgatcaatgtcgggttgggttatttaactttg
aatcggcgcgcagagaccctctccggtggcgaggcccaacgaatccggctggccagccag
attggagccggtttggtgggagtgatgtatattctggatgagccttctattggtttgcat
cagcgggatcatcagcggttgctggagaccttgatccgcctccgcgatctgggcaacaca
gtcattgtggtggagcacgatgaggaggctatccgagcggctgatcaggtgattgatatg
ggtcctggcgcgggcaggcatgggggggaaatcgtggcccaaggcacgccgctcgagatt
atggctaatccggcctccttgactgggcagtatctcaaaggacagcaagaaatccccatg
ccctgccagcgggtgcctttcaatacttcccgcctgctttctttacggggggctcatggc
aataatctggatcaggtggatttggatattcctctaggagcaatgacctgtatcacagga
gtttccggctcgggtaaatccaccttaatcaatgacaccctgttgcgggcagcgactcga
attcttcatcgagcctcggttgaggctgccccttatgaaagcattgagggcttggaacat
ctggataaggtgatcgctatcgatcaaaatcccattggccgcacgccccgttccaacccg
gccacttatactggattttttgcctctattcgcagcctattcgcgggcacgcatgaggct
cgttcccggggctatgggccgggtcgtttcagttttaatgtcaagggaggacgctgcgaa
tcttgccaaggcgatggcctaatcaaggtagagatgcactttcttcccgatctctatgtg
gcctgcgatgtttgccagggcaagcgctataatcgggaaaccttagagattcgttataag
ggcaaaaatattgatgaaatattagccatgacggtggaagaggcgcaggatttctttgct
aatgttccggcagtagcccgaaagctgctgactttgctggaggtgggactctcctatatc
acgctagggcaaaatgcagttaccctctcgggtggcgaggcccagcggatcaaactggcg
aaagagctagccaggcgggatacggggcggactctgtacattctggatgagccgaccacg
gggttgcattttcatgatattgcccagcttctccaagtactattgcggttgcgggatggg
ggcaataccattgtgatcattgagcaccatttggatgtcatcaagacggctgactggctt
gtcgatttaggtcccgagggaggggaaagggggggaaggattattgctaccggggcgcct
gagacggtagctgcctgtcaagattcctatactggacgttatctggctcggattttaccc
aaggccaagcgaggtcagtccccggtgcagcaaagccatgatcgtgcgttttaa
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