Neisseria wadsworthii: H3L96_00425
Help
Entry
H3L96_00425 CDS
T07067
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
nwd
Neisseria wadsworthii
Brite
KEGG Orthology (KO) [BR:
nwd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nwd03009
]
H3L96_00425 (rlmD)
Enzymes [BR:
nwd01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
H3L96_00425 (rlmD)
Ribosome biogenesis [BR:
nwd03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
H3L96_00425 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
Methyltransf_25
TRM5-TYW2_MTfase
Methyltransf_15
MTS
UPF0020
Methyltransf_11
Methyltrans_SAM
Methyltransf_23
RrnaAD
Methyltransf_32
PrmA
Motif
Other DBs
NCBI-ProteinID:
QMT35780
LinkDB
All DBs
Position
complement(78001..79323)
Genome browser
AA seq
440 aa
AA seq
DB search
MQGSIQGKAKVFAVDYEGRGVARSDGKTVFIQGALPGEEVAFHVARSKKSFDEADVTHIF
HASPDRIEPACQHFGVCGGCVLQHASIKAQVAYKQRVMEEQLLRIGKVKPENILPPIYGN
PWAYRHRARLSVSKNKQSGVSLGFRSRRSNEVVNLNECPVLPPHVEEVLPHLRTLLGSLP
DNVVVEYVEFSVGKLLTALNIRTNTCLSEKDLDKLKVFSDRHLQTKHFAWQIWLQTKQSQ
AKPFYPENMPDLFYEIPEFGVRMPFRPGDFTQINQELNTLMIERAVRMLEPKPGERVADL
FCGLGNFTLPIAKSGAHVLGVEGVDYLVQRARKNAKINGCAENTHFETADLFSITEADIR
KWGEIDKMLLDPPRNGAYEIVKALCKPFMPKRIVYVSCNPATFARDAHVIIEKGYKFKEV
GIMNMFPQTAHVESIGLFFR
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgcagggcagtatacaaggcaaggcaaaagtttttgccgtagattatgaaggacggggc
gttgcgcgttctgacggcaagaccgtttttatacaaggtgctttgccgggagaagaagtt
gcttttcatgtggcacgaagcaagaaaagttttgatgaagcagatgtaacccatattttt
catgcttcgcccgaccgcatagaacctgcgtgtcagcattttggtgtgtgcggtggttgc
gtattgcaacatgcctcgataaaagcgcaagtggcatacaaacaaagggtgatggaagag
cagttgctgcgcattggaaaggtaaagccggaaaatattttgcctccgatttatggcaat
ccttgggcttatcgccatcgtgcacgtttaagtgtgtcaaaaaacaaacagagcggagtg
tcgctcggatttcgttcacgacgtagtaatgaagtagtgaatttgaacgagtgccccgtt
ttaccaccgcatgtagaagaagtgttgcctcatttgcgcacgttattaggtagccttcct
gataatgttgttgtggagtatgtagaattttcagtcggcaaactgcttactgccttgaat
attcgtacaaacacatgcctgtctgaaaaagacttggataagctaaaggtattttcagac
aggcatttacaaaccaaacactttgcttggcaaatttggctgcaaaccaaacaaagtcaa
gctaagcccttttatccggaaaatatgcctgatttgttttatgaaatacctgaatttggc
gtgcggatgccattcaggcctggtgattttacgcaaattaatcaggaattaaatacattg
atgattgagcgggctgttcgaatgcttgaacctaagccaggagaaagggtcgcagattta
ttttgcggattgggcaattttaccttgcctatagccaaaagcggcgcacatgttttaggt
gtagaaggtgtggattatctggtgcaacgggcacgcaagaatgccaaaatcaacggttgt
gcagagaatacgcattttgaaacagcagatttgttttcaattacagaagcggatattcga
aaatggggtgaaatagacaaaatgttacttgacccaccgcgaaacggagcgtatgaaatt
gttaaagcattgtgtaaaccttttatgcctaagcggatagtgtatgtttcctgcaatcct
gcaacatttgctagagatgctcatgtaataattgaaaaaggctataaattcaaagaggta
ggtattatgaatatgtttccgcagacagcacatgttgagtctatcggtcttttttttaga
taa
DBGET
integrated database retrieval system
