Neisseria wadsworthii: H3L96_00855
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Entry
H3L96_00855 CDS
T07067
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
nwd
Neisseria wadsworthii
Pathway
nwd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nwd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H3L96_00855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nwd03019
]
H3L96_00855
Enzymes [BR:
nwd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
H3L96_00855
Messenger RNA biogenesis [BR:
nwd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
H3L96_00855
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
UvrD-helicase
AAA_22
Helicase_C_2
Motif
Other DBs
NCBI-ProteinID:
QMT35850
LinkDB
All DBs
Position
complement(159979..161352)
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AA seq
457 aa
AA seq
DB search
MNQFSALGLGGEIVSALTEQGYETPTPIQEAAIPKALAGHDLLAAAQTGTGKTAAFMLPS
LERLKRYATASTSPAMHPVRMLVLTPTRELADQIDQNVQGYIKNLPLRHTVLFGGVSMDK
QTAELRAGCEIVVATVGRLLDHVKQKNINLNKVEIVVLDEADRMLDMGFIDDIRTIMQMF
PKPRQTLLFSATFSPAIRKLANDFMNRPEQIEVAAQNTTNANVEQHVIAVDTAKKRSLLE
RLIVDLNMNQVIVFCKTKQSVDQVTRNLVRSEISAQSIHGDKSQQTRLETLNAFKEGSLR
VLVATDVAARGLDIAELPFVINYEMPTQPEDYVHRIGRTGRAGADGVAISLMDENEQKMF
EAIKALTGNDIPLERIEGFEPRWGNDAAESPTQQRAPRREKSERSERAERASSGSESRGR
RSEEKDAGSACGKIAGRSRRSRRERQKCALVQPNFGL
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
gtgaatcaattttctgcactcggcttaggcggcgaaatcgtttccgccctgaccgaacag
ggctatgaaacccccacgcccattcaagaagccgccattcccaaagccttggctggccac
gacttgctcgccgcagcccaaactggcaccggaaaaaccgccgcatttatgctgcccagc
ctcgagcggctgaaacgctatgccacagcaagcacttcacccgccatgcatccggtgcgt
atgctggtgttgacgcccacgcgcgagttggccgaccaaatcgaccaaaacgtgcagggc
tacatcaaaaacctgccgctgcgccataccgttttattcggcggcgtgagcatggataag
caaaccgccgaactgcgcgcgggctgcgaaatcgttgtggccaccgtgggccgcctgctt
gaccatgtcaaacaaaaaaacatcaacttaaacaaagtggaaatcgtggtgctcgacgaa
gccgaccgcatgctcgacatgggctttatcgacgatatccgcaccatcatgcaaatgttt
cccaaaccgcggcaaaccctgctgttttccgccactttctccccggccatccgcaaattg
gccaatgattttatgaatcgtcccgagcaaattgaagtggcagcgcaaaacaccaccaat
gccaatgtggagcagcatgtgattgcggttgacaccgccaaaaaacgcagcttgctggag
cgtttgattgtggatttgaacatgaatcaagtgatcgtgttctgcaaaaccaagcaaagc
gtggaccaagttacccgcaatctggtgcgcagcgagatttccgcgcagtctatccacgga
gacaaatcgcagcaaacccgtctggaaacgttgaacgcttttaaagaaggcagtctgcgt
gttctggtggctaccgatgttgccgcacgcggcttggatattgccgaactgccttttgtg
attaactacgaaatgcccacccagccggaagattatgtgcaccgaatcggccgcacaggc
cgcgcaggtgccgacggtgtggcgatttctttgatggatgaaaacgagcagaagatgttt
gaagccatcaaagcgctgaccggcaacgatatccctcttgaacggattgagggcttcgag
ccgcgttggggcaatgatgcagccgaaagcccaacgcaacaacgcgccccgcgccgtgaa
aaaagcgagagaagcgagcgtgccgaacgagcaagttcgggaagcgaatcgcgcggccgc
cgctcagaagaaaaagacgccggttccgcctgcggcaaaattgcggggcgcagccgccgt
agccgccgggaacgccaaaaatgtgcgctggtgcagcctaacttcggtctgtaa
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