Neisseria weaveri: SAMEA3174300_0178
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Entry
SAMEA3174300_0178 CDS
T04355
Symbol
cafA
Name
(GenBank) cytoplasmic axial filament protein
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
nwe
Neisseria weaveri
Brite
KEGG Orthology (KO) [BR:
nwe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nwe03019
]
SAMEA3174300_0178 (cafA)
03009 Ribosome biogenesis [BR:
nwe03009
]
SAMEA3174300_0178 (cafA)
Messenger RNA biogenesis [BR:
nwe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SAMEA3174300_0178 (cafA)
Ribosome biogenesis [BR:
nwe03009
]
Prokaryotic type
rRNA processing factors
SAMEA3174300_0178 (cafA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
ARM_LIN
Motif
Other DBs
NCBI-ProteinID:
SAY50311
LinkDB
All DBs
Position
1:complement(195938..197431)
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AA seq
497 aa
AA seq
DB search
MLPSIPLPKDVIRPPETVLVNITPQETRVAILEENNICELHIERNSGHGLVGNIYLGIVR
RVLPGMQSAFIDIGLERAAFLHIVDVLEQRQNPDETQRIEHMLFEGQSVLVQVIKDPINS
KGARLSTQISLAGRFLVHLPQDDHIGISQRIEDEDERNNLRDRLLSLLPENASHGYIIRT
SAETATLAELQADIDYLTKVWENIQHQAKTKPPETLLYQDLPLSLRVLRDMFSDNTREIL
VDSKENHTRMMQMAEQYVQNAVDKIHLFKGDRPLFETHNIEQEISRALQPRVNLTFGSYL
IIESTEAMTTIDVNTGGFVGARNFDETIFRTNLEACHAIARELRLRNLGGIIIIDFIDMA
QDSHREAVLQELAKALSFDRTRVTLNGFTSLGLVELTRKRTRENLSQILCEPCPTCQGRG
QLKTPQTVCYEIQREIVREARRYDAQHFRILAAPNVIDLFLDEESQSLAMLIDFIGKPIS
LSVETTYTQEQYDIVLL
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgctgcccagcatcccgttacccaaagacgtgatcaggccgccggaaacggttttggtc
aacatcaccccccaagaaacccgtgtcgccattctggaagaaaacaacatctgcgaactg
catatcgaacgcaacagcggacacggcttggtcggcaatatctatttaggcatcgtccgc
cgcgttctgcccggtatgcagagtgcatttatcgacatcggcttggaacgcgccgccttc
ctccacattgtcgatgtgctcgaacaacgccaaaacccggacgaaacacaacgtatcgaa
cacatgctatttgaagggcaatccgtattggtacaagtcatcaaagaccccatcaacagc
aaaggagcaaggctgtccacccaaatctcattggccggaaggtttttagtccacctgccc
caagacgaccacatcggcatttcacaacgcatcgaagacgaagacgaacgcaacaacctg
cgcgaccgcctgctcagcctgctgcccgaaaacgccagtcacggctacatcatccgcacc
agtgcagaaaccgccactcttgcagagcttcaagccgatatcgactatctgaccaaagtc
tgggaaaacatccagcatcaagccaaaaccaaaccgccagaaaccctgctctatcaagac
ctacccttaagcctgcgcgtactgcgcgacatgttcagcgacaacacccgagaaattctg
gtcgactccaaagaaaaccacacccgcatgatgcagatggccgaacaatatgttcaaaac
gccgtcgataaaatccacctgttcaaaggcgaccgccccctgtttgaaacccacaacatc
gaacaggaaatcagccgcgccctacaaccacgcgtcaatctgactttcggcagctatcta
attatcgaatccaccgaagccatgaccaccattgatgtcaataccggcggctttgtcggc
gcacgcaacttcgacgaaaccattttccgtaccaatctcgaagcctgccacgccatcgca
cgcgaactgcgtttgcgcaatctcggcggcatcatcatcatcgactttatcgatatggcg
caagattcccaccgcgaagccgtattgcaggaattggccaaagccctcagtttcgaccga
acccgagttaccctgaacggctttaccagtctgggattagtggaattgacacgaaaacgg
acacgcgaaaacctaagccagattttgtgcgaaccctgtccaacctgccaaggcagaggc
cagctcaaaaccccgcaaaccgtgtgctacgaaatccaacgcgaaatcgtacgcgaagcc
cgccgttacgacgcgcaacacttccgcattttggcggctcccaatgttatcgacctgttt
ctcgacgaagaatcccaatctctggccatgctaatcgactttatcggcaaaccgatttct
ctgtccgtggaaaccacttatacgcaagaacaatacgatattgtattgttatag
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