Neisseria weaveri: SAMEA3174300_0200
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Entry
SAMEA3174300_0200 CDS
T04355
Symbol
polC_1
Name
(GenBank) DNA polymerase III subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
nwe
Neisseria weaveri
Pathway
nwe03030
DNA replication
nwe03430
Mismatch repair
nwe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nwe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SAMEA3174300_0200 (polC_1)
03430 Mismatch repair
SAMEA3174300_0200 (polC_1)
03440 Homologous recombination
SAMEA3174300_0200 (polC_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nwe03032
]
SAMEA3174300_0200 (polC_1)
03400 DNA repair and recombination proteins [BR:
nwe03400
]
SAMEA3174300_0200 (polC_1)
Enzymes [BR:
nwe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SAMEA3174300_0200 (polC_1)
DNA replication proteins [BR:
nwe03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SAMEA3174300_0200 (polC_1)
DNA repair and recombination proteins [BR:
nwe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SAMEA3174300_0200 (polC_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
SAY50330
LinkDB
All DBs
Position
1:215834..217225
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AA seq
463 aa
AA seq
DB search
MALVSRWLHLANSFLQLNRPVVVVDLETTGGNMLQDRITEIALLRFEAGEVKAYEWLVNP
LQPIPVFISGLTGITDEMVAGAPTFAEIAEELLPLLRGALVVAHNSRFDYTFLCHEFRRA
GLDFGTAAVCTVQLSRSLYPEFFKHNLDSIIERFGIEADSRHRAMTDVLALVDFMELSLK
EKGREIWLKQFAALMNPKALPVGLPSKLAAQLEALSDGVGVLVWLDREDRALAVRAHERA
YMETAAMLNGKNRPGFIESADSVRFVPAYGRLHAVWLKAQLMDEYGLRPSENPGRYFTVR
FVADEYRRLQARIVGLANGCFTFPPNGLFLHKKSAKSALLEWARCYGLCPQSLNILPSGH
GEGNVCPVSELGQCDGLCRTAQRVDELNVKIQDKAGHLPVADCGRAHELEIVEQDAVSGR
EVVLLCKGGALALPGGRWYFDDELPGILKAKLKKGQAEVKVVF
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggcgttggtgtcgcgttggttgcatttggccaattcttttttacagttgaaccgccct
gttgtggttgtcgatttggaaacgacaggaggaaatatgctgcaggacaggataaccgag
attgctttgctgcgttttgaagcaggggaagttaaggcttatgaatggctggttaatcct
ttgcagcccattcctgtttttatttccggactaacgggaattaccgatgagatggtggcg
ggtgcgccgacttttgcggaaattgcggaagagcttttgccgttgttgcgaggtgcattg
gttgtggcgcataacagtaggtttgattatacctttttatgtcatgaattccgtcgtgcc
ggtttggattttggtacggcggcggtatgcacggttcaattgtcgcgcagcctgtatcct
gaatttttcaaacacaatttagacagtattatcgagcgtttcggaattgaggccgacagc
cgccatcgtgctatgacggatgtgttggcattggttgattttatggaattgagtttaaag
gaaaaaggaagagaaatttggctgaagcagtttgccgccttgatgaatccgaaagcattg
cctgttgggttgccgtctaagttggctgctcagttggaagcattgtcggacggtgtcggt
gtgttggtgtggttggatcgtgaagaccgggcgttggccgttcgtgcccacgagcgtgct
tatatggaaacggctgcgatgttgaacggcaaaaaccgaccgggttttattgagtcggca
gacagtgtgcgttttgtgcccgcatatgggcggttgcatgccgtatggctgaaagctcag
ctgatggatgaatatggtttgaggccgtctgaaaatccgggaaggtattttacggtgcgt
tttgtggcggatgaataccggcgtttgcaggccagaatagtgggtttggctaacggttgt
tttacttttccgccgaatgggctgtttctgcataaaaaatctgcaaaaagtgcgttgctg
gagtgggcgcgttgctatggtttgtgtccgcagtctttgaatatattgccttcgggtcat
ggggagggcaatgtgtgtccggtgagtgaattgggacaatgcgacggtttgtgccgcact
gcacaaagggtagatgaattgaatgtcaaaatccaagacaaggcaggacatcttccggtt
gcggattgtggtagggcgcatgagttggagattgtggagcaggatgccgtatcgggtagg
gaagtggtgctgttgtgcaaaggcggggctttggctttaccgggcgggcgttggtatttt
gatgatgagttgccgggtattttgaaagccaaattgaaaaaagggcaggcggaagtcaaa
gtggttttttaa
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