Neisseria weaveri: SAMEA3174300_0247
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Entry
SAMEA3174300_0247 CDS
T04355
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
nwe
Neisseria weaveri
Pathway
nwe02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
nwe00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SAMEA3174300_0247 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nwe03021
]
SAMEA3174300_0247 (rpoD)
Transcription machinery [BR:
nwe03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SAMEA3174300_0247 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r1_1
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
SPO22
GTP_EFTU
DUF5660
MitMem_reg
SIP1
Motif
Other DBs
NCBI-ProteinID:
SAY50376
UniProt:
A0A3S4Z5B0
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All DBs
Position
1:complement(285094..287046)
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AA seq
650 aa
AA seq
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MSTKNTPSQDSDYNEQDDNRTLSPDEQRTRLRQLIIMGKERGYITYSEINDALPDDMSDA
EQIDNIVSMISGLGIQVTEQAPDAEDILLSDNAAGMTDDDAVAEAEAALSSVDSEFGRTT
DPVRMYMREMGQVDLLTREDEIIIAKKIENALKNMVQAISACPGSISDILELIERVRADE
IKVDEVVEAIIDSNEVLLNELGLGHLEQSGGMENSEDPEDESDPDEEDVDEADAEAISAT
NLEELKAKVLDHFEQIRTDYDKMVVQLKKHDSRHPSYLKHRDAIAAKLLEVRFATRQIEN
LSSSLRNRVENIRKLEREIRDICLERVHMERDYFIQNFLPSITDLDWVNNEINKGRVWSN
ALDRFRHAIIEKQTFLSDMEKQAQISIEELKEINKNMVVSEKETSAAKQEMIQANLRLVI
SIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQAR
TIRIPVHMIETINKMNRISRQYLQENGEEPDSAKLAELMEMPEDKIRKIMKIAKEPISME
TPIGDDDDSHLGDFIEDINNVAPADAAMYSSLREVTKDVLESLTPREAKVLRMRFGIDMN
TDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPTRSDRLKSFLDSEEHKQ
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgtctactaaaaatacaccgtcccaagactctgactataacgaacaagacgacaaccgc
acattaagtcctgacgaacagcgtaccagactgcgccaactcattatcatgggtaaagag
cgtggctacattacctactcggaaataaatgatgccctgcccgacgatatgtctgatgcc
gaacaaatcgacaatattgtcagcatgatttcaggcttgggaatccaagtaaccgagcag
gctcccgatgccgaagatattctgctcagcgacaacgctgccggaatgacggatgatgat
gccgttgccgaagcggaagctgctttatccagcgtagatagcgaattcggccgcacgacc
gatcctgtgcgcatgtatatgcgtgagatggggcaagtcgatctgctgactcgcgaagac
gaaattatcatcgccaaaaaaatcgaaaatgcattgaaaaatatggtacaggccatctca
gcctgcccaggctctatttcagatatcttagagctaatcgagcgcgtccgtgctgacgaa
atcaaagtcgatgaagtcgtagaagccattatcgactccaacgaagtcttgctaaacgaa
ttaggcttaggccacttagagcaaagcggcggaatggaaaacagcgaagatccggaagat
gaatccgatccggatgaagaagatgttgacgaagccgatgccgaagccatatctgcgact
aatctggaagaacttaaagcaaaagtattggatcacttcgaacagatccgtaccgattat
gacaaaatggttgtccaattaaaaaaacacgacagccgccatccttcttatctcaaacat
cgcgatgcgattgcagccaaactgcttgaagttcgctttgctacccgccaaattgaaaac
ttaagcagctccctgcgcaaccgtgtagaaaatatccgcaaattagaacgtgaaatccgt
gacatttgtttagaacgtgtgcacatggagagggattactttatccaaaatttcctccct
tccattacagatctggattgggtaaacaatgagatcaataaaggcagagtatggagtaat
gctttagaccgcttccgccatgcaattattgaaaaacaaactttcttatcagacatggaa
aaacaagctcaaatttccattgaagagctgaaagaaatcaataaaaacatggtcgtaagc
gaaaaagagacttctgcggccaaacaagaaatgattcaagccaacttgcgtttggttatt
tctatcgcgaaaaaatataccaaccgcggtctgcaatttctggacttaattcaagaaggt
aacatcggcttgatgaaagcggtagataagtttgaatatcgtcgaggctataagttttca
acttatgccacttggtggatccgtcaagccattacccgatcaattgccgaccaagcacgc
actatccgcattccggttcacatgattgaaaccatcaataaaatgaaccgtatttcacgt
caatatttgcaggaaaacggtgaagaacctgattctgcaaaattggccgagctgatggaa
atgccggaagataaaattcgaaaaataatgaaaatcgctaaagaaccgatttctatggaa
actccaatcggtgatgacgacgattcacatttgggtgactttatcgaagacatcaacaat
gtagctcctgcagatgccgccatgtactccagcctgcgtgaagtaactaaagatgtgctg
gaaagtcttactcccagagaggcaaaagttttacgtatgcgcttcggtatcgatatgaat
accgatcacacattggaggaagttggcaagcagtttgacgtaactcgtgaacgaatccgc
caaatcgaagccaaagccttacgcaagcttcgtcaccccactagaagtgatcgcctgaaa
agtttcttggacagcgaagagcacaagcaataa
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