Neisseria weaveri: SAMEA3174300_0302
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Entry
SAMEA3174300_0302 CDS
T04355
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
nwe
Neisseria weaveri
Pathway
nwe03030
DNA replication
nwe03430
Mismatch repair
nwe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nwe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SAMEA3174300_0302 (holB)
03430 Mismatch repair
SAMEA3174300_0302 (holB)
03440 Homologous recombination
SAMEA3174300_0302 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nwe03032
]
SAMEA3174300_0302 (holB)
03400 DNA repair and recombination proteins [BR:
nwe03400
]
SAMEA3174300_0302 (holB)
Enzymes [BR:
nwe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SAMEA3174300_0302 (holB)
DNA replication proteins [BR:
nwe03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SAMEA3174300_0302 (holB)
DNA repair and recombination proteins [BR:
nwe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SAMEA3174300_0302 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
Cleaved_Adhesin
Motif
Other DBs
NCBI-ProteinID:
SAY50429
UniProt:
A0A3S4ZMN3
LinkDB
All DBs
Position
1:complement(342465..343442)
Genome browser
AA seq
325 aa
AA seq
DB search
MIYPWHQQQWQQLSSTRQNHPNAWLFIGKENTGKTAFAYHTAQALLCEQNPESGEPCQTC
PSCHLFNQSSHPDFYLLTPEMPEDGAIGRKLLQIKIDAVRNILDNVHLTSVRGGKRIILI
APAESMNPQAANALLKILEEPPADVVFLLVCHSRDKLLPTIKSRCRQMLLPAPSRAEALA
YLHEHNTENAEELLAFHAGAPLFQATPEADKLRTELLSLLSSPRLLAILDYAATFDKSKL
PLAIFLDWMHKWLLDLGLSQQNTQPLYYPAYRDALSQTAKRTDKLQLFALTQRLNKLNPY
GYHTLSVKIQLEDILIEYLHFWQNK
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgatttatccatggcatcaacaacaatggcaacaactgtcatcaacccggcaaaaccac
cccaatgcctggctgtttatcggcaaagaaaacaccggtaaaaccgcttttgcctatcat
accgcccaagcccttttatgcgagcagaacccggaatcgggcgaaccttgccaaacttgt
ccttcatgccacttgtttaatcaaagcagccaccccgatttctatcttctgacaccggaa
atgcccgaagacggcgcaattggcagaaaacttttgcaaatcaaaatcgatgccgtacgc
aatattctcgataacgtccatctcacctccgttcgaggcggcaaacgcatcattttgatt
gcaccggctgaaagcatgaacccacaggctgccaacgccctactgaaaattttagaagag
cctcccgctgatgtcgtctttttacttgtctgccactcacgcgacaaactgctgcccaca
atcaaaagccgttgccggcaaatgctgcttcccgctccctcccgagccgaagcactggct
tacctacatgaacacaataccgaaaatgctgaagagttattggcatttcacgccggagcc
ccactcttccaagcaacaccggaagccgacaaactgcgtaccgaattattgtctttatta
agttcgccacgattactggccattttggattacgccgctacgtttgataaaagcaagttg
ccactggccatttttctagattggatgcataaatggcttttggatttgggattatcgcaa
caaaatacccagccgctttattaccccgcttatcgtgatgcgttaagccaaaccgccaag
cgaaccgacaaacttcaactgtttgcattaacccaacgtctgaataaattgaatccttac
ggatatcataccttaagtgttaaaatacaacttgaagatatactgattgaatatttacac
ttttggcaaaataaatag
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