KEGG   Neisseria weaveri: SAMEA3174300_0429
Entry
SAMEA3174300_0429 CDS       T04355                                 
Symbol
rho
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
nwe  Neisseria weaveri
Pathway
nwe03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:nwe00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SAMEA3174300_0429 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nwe03021]
    SAMEA3174300_0429 (rho)
   03019 Messenger RNA biogenesis [BR:nwe03019]
    SAMEA3174300_0429 (rho)
Transcription machinery [BR:nwe03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     SAMEA3174300_0429 (rho)
Messenger RNA biogenesis [BR:nwe03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     SAMEA3174300_0429 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N S1CSD-TOTE-2 OB_RNB AAA_25 AAA POTRA_3 NACHT AAA_22 Fungal_virus_P2_C
Other DBs
NCBI-ProteinID: SAY50551
UniProt: A0A3S5ABZ2
LinkDB
Position
1:474531..475799
AA seq 422 aa
MHVSELQTRHISKLLELAEEQGIENANRLRKQDLVFAIVRQLMKQGEAFNCSGTLEILPD
GFGFLRSSDTSYLAGPDDIYVSPSQIRRFNLHTGDTIEGTVRVPKDNERYFALVRLDSIN
GDKPEVCKHKILFENLTPLFPTKQFKLERDIRAEENITSRAIDLVSPIGRGQRALLVAPP
KSGKTVMLQNIAHAITANYPEVELIVLLIDERPEEVTEMSRSVRGEVVSSTFDEPATRHV
QVAEMVLEKAKRMVEHKKDVVILLDSITRLARAYNTVVPASGKILTGGVDANALHRPKRF
FGAARNVEEGGSLTIIATALVETGSRMDDVIYEEFKGTGNMELHLDRRMAEKRLFPAINI
NKSGTRREELLVPNDQLQRMWLLRKFLHPMDEIEATEFLVGKLKDSKDNDDFFELMRGKA
AK
NT seq 1269 nt   +upstreamnt  +downstreamnt
atgcacgtttctgaattacagacccgccatatttcaaaactattggagttggctgaagag
caaggcattgaaaatgccaaccgcttgcgcaaacaggacttggtatttgccattgtccgc
caattgatgaagcagggggaagctttcaattgttccggcactttggaaattctgccggac
ggtttcggttttttgagaagttcggatacttcttatctggccgggcccgacgatatttat
gtttcacccagtcaaatccgccgtttcaatctgcataccggcgataccattgagggtacg
gttcgtgttcctaaagacaatgaacgctactttgctttggttcgtttggacagtatcaac
ggcgacaaaccggaagtctgtaaacataaaattctctttgaaaacctgacccctttattc
ccgaccaaacaattcaaactcgagcgcgatatccgtgccgaagaaaacatcaccagccgg
gctattgatttggtttcaccgatcggccgcggacagcgtgcgttgttggtagcgccgccc
aagtcgggtaaaaccgtgatgctgcagaatatcgcgcacgccattacggccaattatcct
gaagtggaattgatagttctgctgattgacgaacgcccggaagaggtaacggaaatgtcg
cgcagcgtgcgcggcgaagtggtgtcttcgactttcgacgagcctgccacacgccatgtg
caagttgccgaaatggttttggaaaaagccaagcgcatggttgaacataaaaaagatgtg
gtgattttgttggattcgattacccgtttggcacgcgcttacaatacggttgttccggct
tccggcaaaattctgaccggtggtgtggatgcgaatgcgttgcatcgtccgaagcgtttt
ttcggtgcggcgcgtaatgttgaagagggcggatcgctcaccattatcgcgactgctttg
gtagaaaccggcagccgtatggatgatgtgatttacgaggaatttaaaggtacgggcaat
atggagttgcatcttgaccgccgtatggccgaaaaacgactgtttcccgctatcaatatc
aacaaatccggcacacgccgcgaagagcttttggtgccgaacgaccaacttcaacgcatg
tggctgctgcgtaaattcctgcaccccatggatgaaatcgaagcaaccgaatttttggtt
ggcaaactcaaagactctaaagacaatgatgatttttttgagttgatgcgcggtaaagcc
gctaaataa

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