Neisseria weaveri: SAMEA3174300_1382
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Entry
SAMEA3174300_1382 CDS
T04355
Symbol
pnp
Name
(GenBank) polynucleotide phosphorylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
nwe
Neisseria weaveri
Pathway
nwe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nwe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SAMEA3174300_1382 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nwe03019
]
SAMEA3174300_1382 (pnp)
03016 Transfer RNA biogenesis [BR:
nwe03016
]
SAMEA3174300_1382 (pnp)
Enzymes [BR:
nwe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
SAMEA3174300_1382 (pnp)
Messenger RNA biogenesis [BR:
nwe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
SAMEA3174300_1382 (pnp)
Transfer RNA biogenesis [BR:
nwe03016
]
Prokaryotic type
tRNA degradation factors
SAMEA3174300_1382 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
OB_RRP5_4th
KH_2
Methyltransf_FA
DUF5813
S1_RRP5
DUF4057
KH-I_KHDC4-BBP
KH_PNO1_2nd
Motif
Other DBs
NCBI-ProteinID:
SAY51481
LinkDB
All DBs
Position
1:1486453..1488582
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AA seq
709 aa
AA seq
DB search
MFNKHVKSFQYGEHTVTLETGEIARQAAAAVKVSMGDTVVLVAVTANKDVKEGQDFFPLT
VDYLERTYAAGKIPGGFFKREGKQSEKEILTSRLIDRPIRPLFPEGFYHDIQIVAMVVSV
DPEIDSDIPAMIGASAALVLSGVPFAGPIGAARVGYVNNVYVLNPTKAQLAKSQMDLVVA
GTQKAVLMVESEAQELPEHVMLGAVVYGHEQMQAVINAINEFADEVNPEVWDWKAPETNE
ELVAKVREISGTTIAEAFKIRQKQARSAKLDEAWAAVKDALITEETDTLTANEIKGIFKQ
LEADVVRGQILDGQPRIDGRDTRTVRPINIQTGVLPRTHGSALFTRGETQALAVATLGTQ
RDEQIIDALSGEYTDRFMLHYNFPPYSTGEVGRMGAPKRREIGHGRLAKRALVAVLPSPE
EFSYTMRVVSEITESNGSSSMASVCGGCLSLLSAGVPLKAHVAGIAMGLILENNKFAVLT
DILGDEDHLGDMDFKVAGTTEGVTALQMDIKIQGITKEIMQIALEQAKEARLHILAQMKE
AVEGPQELSQHAPRLFTMKINQDKIRDVIGKGGETIRSITADTGTEINIAEDGTITIAAT
TQEAGDAAKKRIEEITAEVEVGKVYDGTVLKLLDNNVGAIVSVMPGKDGLVHISQIAHER
VKNVSDYLQVGQNVKVKALEVDDRGRVRLSMKALLEAPEREQRAEPAAE
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaaacacgttaaatctttccaatacggcgagcacaccgtaaccctcgaaacc
ggtgaaatcgcccgccaagctgcggcggccgtgaaagtttcgatgggcgacaccgtggtt
ttggtggcggttaccgccaataaagacgttaaagaaggtcaagactttttcccgctgacg
gttgactatctcgagcgcacttatgctgcgggcaaaatccccggcggtttcttcaaacgc
gaaggcaagcaaagcgaaaaagaaattcttaccagccgcctgatcgaccgccccatccgc
ccgctgttccccgaaggtttctaccacgatatccaaatcgtagcgatggtggtttctgtt
gaccctgaaatcgattccgacatccccgccatgatcggcgcgtctgccgcactggtgttg
agcggtgtgccgtttgccggcccgatcggtgccgcgcgcgtgggttatgtgaacaatgtt
tatgtgttgaacccgaccaaagcgcaactggctaaatcgcaaatggatttggtggttgcc
ggtacgcaaaaagccgtgctgatggtggaatccgaagcgcaagagctgccagagcatgtg
atgttgggcgcggtggtgtacggccacgagcaaatgcaggccgtgattaatgccatcaat
gaatttgccgacgaagtcaaccccgaagtttgggattggaaagcaccggaaaccaacgaa
gaattggtggccaaagttcgtgaaatttccggtaccacgattgccgaagcgttcaaaatc
cgccaaaaacaagcccgttccgccaaattggacgaagcttgggcagccgtgaaagacgct
ttgattaccgaagaaaccgacacgctcaccgccaacgaaatcaaaggcattttcaaacaa
ctggaagccgacgtggtgcgcggtcagattttggacggccaaccgcgtatcgacggccgc
gatacccgcaccgtgcgcccgatcaacatccaaaccggcgtgttgccgcgcacccacggt
tccgccctgtttacccgcggcgaaacccaagccttggcagtggccactttgggcactcag
cgcgacgagcaaatcattgatgccttgagcggcgaatacaccgaccgcttcatgctgcac
tacaacttcccgccgtactctaccggcgaagtgggccgcatgggtgcgccgaaacgccgc
gaaatcggccacggccgtttggctaaacgcgcgctggttgccgtgctgccttcgccggaa
gaattcagctacaccatgcgcgtggtttccgaaattaccgagtctaacggctcgtcttct
atggcttccgtgtgcggcggctgtttgagcctactgtctgccggtgtgccgctgaaagca
cacgttgccggtatcgccatgggcttgattttggaaaacaacaaattcgccgtgttgacc
gatattctgggcgacgaagaccacttgggcgatatggactttaaagtggccggcaccacc
gaaggcgttaccgcgctgcaaatggacattaagattcaaggcattaccaaagaaatcatg
cagattgctttggagcaggccaaagaagcgcgtctgcacattctggcgcagatgaaagaa
gccgttgaaggcccgcaagagctgtcgcaacatgctccgcgcctgtttaccatgaagatc
aaccaagacaaaatccgcgatgtgatcggcaaaggcggcgaaaccatccgcagcatcacc
gccgacaccggcaccgaaatcaatattgccgaagacggcacgattaccattgccgccacc
actcaggaagcgggcgatgcggcgaaaaaacgcatcgaagaaatcaccgccgaagtggaa
gtgggcaaagtgtacgacggtacggtattgaaactgttggataacaacgtcggcgccatc
gtttccgtgatgccgggcaaagacggcttggtacacatcagccaaatcgcccacgaacgc
gtgaaaaacgtgagcgactacctgcaagtcggtcaaaacgtgaaagtgaaagcgctggaa
gtggacgaccgcggccgcgtgcgcctgtcgatgaaagccttgctggaagcacccgaacgc
gaacaacgcgccgaacctgctgccgaataa
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