Neisseria weaveri: SAMEA3174300_1622
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Entry
SAMEA3174300_1622 CDS
T04355
Symbol
recJ
Name
(GenBank) RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
nwe
Neisseria weaveri
Pathway
nwe03410
Base excision repair
nwe03430
Mismatch repair
nwe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nwe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SAMEA3174300_1622 (recJ)
03430 Mismatch repair
SAMEA3174300_1622 (recJ)
03440 Homologous recombination
SAMEA3174300_1622 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nwe03400
]
SAMEA3174300_1622 (recJ)
DNA repair and recombination proteins [BR:
nwe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
SAMEA3174300_1622 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
SAMEA3174300_1622 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
SAMEA3174300_1622 (recJ)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
SAY51710
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Position
1:complement(1744414..1746108)
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AA seq
564 aa
AA seq
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MSVKIHTRPVDAGVCQTLIQAGADPLLARLCAARAVASPDELQDKLSSLLSFRDLKGCVE
AAERLADALEKRQKILIVADYDADGATACAVGVKGLAAMGATVDFLVPNRFEHGYGLTPE
LAEIAAGQGVDLLVTVDNGIASLAGVAKAQELGLDVIVTDHHLPAETVPDCIIVNPNQQG
CTFPSKSLAGVGVIFYVLTALRAVLRERGYFSDGLPEPNLGELLDLVALGTVADVVALDH
NNRILVSQGLKRMRAGKMRPGIRALFEVARRDWRKAQPFDMGFALGPRINAAGRLDDMSV
GIACLLADNDEEAQSLAAQLNDLNIERREIEQSMLQDALNAFPETLPQGQTTLVAYREDF
HQGVVGIVASRLKDRFYRPTIVFAPADNGEVRGSGRSIPGLHLRDALDLVSKRHPDLILK
FGGHAMAAGLSIREQDVADFQTAFEEVVGGLVDQDDLSQTYVTDGSLPVGEMTLAQAQNL
ALQVWGQGFAPPSFTDEFTVVRQQPMGVNHKKAWLRKEGCEFEAMFWRCTDDIPARIRTV
YRPVANEWRNNVELQLYIDYWEAA
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtcaaaatccacacccgtccggttgatgccggtgtttgccaaactttgattcag
gccggcgccgatcctttgttggcgcgtttgtgtgccgcccgtgcggtggcttcgcccgat
gagttgcaggataagttgagcagcctgttgtcttttcgggatttgaaaggctgtgtcgaa
gcggcggagcgtttggccgatgccttggaaaagcggcagaaaatattgattgtggccgat
tatgatgcagacggcgcaacggcgtgtgcggtcggtgtgaagggcttggcggctatgggc
gcgacagtcgattttttggtgcctaaccgttttgaacacggttacgggttgacgccggaa
ttggcggaaatcgctgctgggcaaggtgtggatttgttggttacggtggataacggtatt
gccagtttggccggagtggctaaagcacaggagttgggcttggatgtgatcgttaccgat
caccacttgccggcggaaacggtgccggactgtattattgtgaatccgaatcagcagggg
tgcacttttccaagcaaaagtctggccggtgtgggtgtgattttttatgtcttgacggct
ttgcgtgcggtattgcgcgagcgcggttatttttcagacggcctgcccgaaccgaacttg
ggcgaattgttggatttggtcgcgttgggtacggtggcggatgtggttgcattggatcac
aacaaccgtattttggtgtcgcaaggtttgaagcggatgcgtgcgggcaaaatgcggccg
ggtatccgtgctttgtttgaggtggcgcggcgggattggcgtaaggcgcagcctttcgat
atgggttttgcattgggcccgcgtatcaatgcggccggccgtttggacgatatgtcggtc
ggaattgcgtgcttgctggccgataacgatgaagaagcgcagagtctggcggcgcagttg
aacgatttgaatatcgagcgccgtgaaatcgagcagtctatgcttcaagatgcgttgaat
gcgtttccggaaacgttaccccaaggccaaactacgctggttgcttaccgtgaggacttt
catcaaggcgtggtcggtattgtggccagccgtttgaaagaccgtttttaccgcccgacc
attgtttttgcgccagccgataacggtgaggttcgcggctcagggcgttcgattccgggt
ttgcatttgcgtgacgctttggatttggtatcgaaacgccatcccgatttgattttgaaa
ttcggtggtcatgccatggcggcgggtttgagtatccgcgaacaagatgtggcggatttt
cagacggcctttgaggaagtggtgggcggtttggtggatcaggacgatctgtcgcaaact
tatgttaccgacggcagcttgccggttggtgaaatgactttggcacaagcccaaaatctg
gctttgcaggtttgggggcaggggtttgcaccgccgagcttcactgacgaatttaccgtt
gtccgccaacagcctatgggtgtgaatcacaaaaaagcatggttgagaaaagaaggctgt
gagtttgaggcgatgttttggcgttgcaccgatgatattccggcgcgtatccgtaccgtg
taccggccggtggcaaacgaatggcgcaacaatgtcgagttgcagctttatatcgattat
tgggaagccgcataa
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