Neisseria weaveri: SAMEA3174300_1815
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Entry
SAMEA3174300_1815 CDS
T04355
Name
(GenBank) DNA helicase
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
nwe
Neisseria weaveri
Brite
KEGG Orthology (KO) [BR:
nwe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nwe03019
]
SAMEA3174300_1815
Enzymes [BR:
nwe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
SAMEA3174300_1815
Messenger RNA biogenesis [BR:
nwe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
SAMEA3174300_1815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
HA2_C
HA2_N
zf_C2H2_ZNF598
Motif
Other DBs
NCBI-ProteinID:
SAY51890
LinkDB
All DBs
Position
1:1943404..1946337
Genome browser
AA seq
977 aa
AA seq
DB search
MPSKNFQYMQNTKIHHNMPSEPLSGSLPPHPDKPSLSENRPRYRLTKLGEQMARLPIDPK
IARILLAAKKHGCMAEILVIASALSIQDPRERPLEAREAAAKAHERFTDKQSDFLAYLNI
WDSFQRERDKGLSNKQLVQWCHQYFLSHLRMREWRELHRQLAEIAIEMGLTSKEQAFRRP
PVQEQLRPSEQAGDQDLSAKLKQKQLDKKQHRAQIRAAKEAGYEQIHRALLTGLIANVGM
KSPDGHDYTGARGSHFHLFPASALFKSKPKWVMAAELTETTRLYARDVAAIQPEWIEQEA
PHLVRYHYFEPHWEQKRGEVVASERVTLYGLTVLPRRPVAYGKVAPEEAREIFIRSALVA
QECNLQTAFFIHNKKLIKEISELEHKSRKQDVLVDEEALFEFYNRRLPQFYEPSEKVGRA
SLPDNTGLSESAENVGRILESDNTAETKAVNKMSDTSIRPTQNPPVSDGLSGSSHHTGRL
KKPLPLADIRTFQSWLKTAERDNPRLLFLTREDLMQHAAAHITEEQFPPHWKNADGKFKL
SYRFEPHHPLDGVTLTLPLTVLNRLHAPALEWLVPGMLREKLQLLIKALPKQIRRICVPV
PDFITQFLESNPNRQEPIIPQLARFIAKTAGDMRLLEQIDQDEWSAFKLPEHCYFNLRII
DDGGQELATGRDLAKLQQELGQAAAVTFRDNTQEFERDNLTNWDIGTLPESIKFARGKQQ
LTGYLGLQKEKNNTIALRLFDTPEAAEQAHRQGVIALMQLQLKEHMKDLSKGIQGFTQAA
MLLKHISADTLRDDLTAAICDRAFIGDDELPRSEKAFKEQIKRARSRLPAVKEAMSRYLQ
DTAAAYAELNGKLGKHPLTYLLRERTQTLLSTGFASRTPWSQWPRLPVYLKAMTLRMEKY
STNPARDAAREADIQELEQMWQDKVQSLLKQNQPVSDGLKMFKWQIEELRVSLFAQELKT
PSPVSVKRLLREWEGLA
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atgccatctaaaaattttcagtatatgcaaaacaccaaaatccaccacaatatgccgtct
gaacccctttcaggcagcctgcccccccacccagataaaccaagcctgtctgaaaaccgc
ccccgctaccgcctgaccaaactcggcgaacaaatggcacgcttgcccattgatcctaaa
atcgcgcgtattttgttggcggcgaaaaagcacggctgtatggcggaaatcttggtgatt
gcctccgccctctccattcaagacccgcgcgagcggccgcttgaggcgcgcgaagcggct
gccaaggcgcacgagcggtttaccgataagcaatccgactttctggcctatctgaatatt
tgggacagcttccagcgcgagcgcgacaaaggcttgtcgaacaaacagttggtgcagtgg
tgccaccaatatttcttatcgcacctgcggatgcgcgaatggcgcgagctgcaccgccaa
ttggccgaaatcgccattgaaatgggtttgaccagcaaagagcaggcattcagacggccg
cccgtgcaagagcagttgaggccgtctgaacaggcaggcgaccaagatttatccgccaaa
ctcaaacaaaaacaactggataaaaaacagcaccgcgcccaaatccgcgccgccaaagaa
gcaggctacgaacaaatccaccgtgccctgctgaccggcctgattgccaatgtcggcatg
aaatcgcccgacggccatgactacaccggcgcgcgcggctcgcactttcatttgttcccc
gcctccgccctgttcaagtccaaacccaagtgggtaatggcggccgaactcaccgaaact
acccgcctttatgcccgcgatgttgccgccatccagcccgaatggatcgagcaggaagcc
ccgcacctcgtgcgctaccactatttcgaaccccattgggagcagaaacgcggcgaagtt
gtcgccagtgagcgcgttaccctctatgggctgaccgtgctgccgcgccgcccagtcgcc
tatggcaaagtcgcccccgaagaagcccgcgaaatctttatccgcagcgcactggtggcg
caggaatgcaatcttcagacggccttttttatccacaacaaaaaactgattaaagaaatc
agtgagttggaacacaagtcgcgcaagcaggacgtgctggtggacgaagaagccttgttt
gagttttacaaccggcgtttaccgcagttttacgagccgtctgaaaaggtaggtcgggca
tctctgcccgacaacacaggcctgtctgaaagtgcagaaaacgtaggtcggattctcgaa
tccgacaacacagcagaaacaaaggcagtaaataagatgtcggataccagtatccgacct
actcaaaatccccccgtttcagacggcctttcaggtagctctcatcacacaggccgtctg
aaaaaaccattgccccttgccgacatccgcaccttccaaagctggcttaaaaccgccgag
cgcgacaacccgcgcctgctgttcctcacccgcgaagacctcatgcagcacgccgctgcg
cacatcaccgaagagcagtttccgccccattggaaaaacgccgacggcaaattcaaactc
agctaccgttttgagccgcatcatccgctcgacggcgtaaccctcaccctgccgctcact
gtgctcaaccgcctccacgcccccgcgctcgaatggctcgtgcccggcatgttgcgcgaa
aaactgcaactgcttatcaaagccctgcccaaacaaatccgccgcatctgtgtgcccgtg
cccgacttcatcacacaatttttagaaagcaaccccaaccgccaagagccgatcatcccc
cagcttgcccgctttatcgccaaaaccgccggcgacatgcgcctgctcgagcaaatcgac
caagacgaatggagcgcgttcaaactgcccgagcactgctatttcaacctgcgcatcatc
gacgacggcggccaggagcttgccaccggccgcgatttagccaaactccagcaagaactc
ggccaagccgccgccgtaaccttccgcgacaacacccaagaattcgagcgcgacaacctc
accaactgggacatcggcaccctgcctgaaagcatcaaattcgcccgcggcaaacaacag
ctcaccggctacctcggcctgcaaaaagaaaaaaacaacaccatcgccctacgcctgttc
gacacccccgaggccgccgaacaagcccaccgccaaggcgtgatcgccctcatgcagctc
cagctcaaagagcacatgaaagacctaagcaaaggcatccaaggcttcacccaagccgcc
atgctgctcaaacacatcagtgccgacaccctgcgcgacgacctcaccgccgccatctgc
gaccgcgcctttatcggcgacgacgaactgccccgcagcgaaaaagccttcaaagaacaa
atcaaacgcgcccgcagccgcctgcccgccgtcaaagaagccatgagccgctacctgcaa
gacaccgccgccgcttacgccgaactcaacggcaaactcggcaaacacccgctcacctac
ctgctgcgcgaacgcacccaaaccctgctgtccaccggattcgccagccgcaccccctgg
agccaatggccgcgcctgcccgtctacctcaaagccatgaccctgcgcatggaaaaatac
agcaccaaccccgcccgcgatgctgcacgcgaagccgatattcaggagctggagcagatg
tggcaagacaaggtacaatcacttttgaaacaaaatcaacccgtttcagacggcctgaag
atgtttaaatggcaaatagaagaactgcgcgtgtcgctgtttgcacaggagttgaaaacg
ccgagtccggtgtcggtgaagaggttgttgagggagtgggagggattagcttga
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