Neisseria weaveri: SAMEA3174300_1832
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Entry
SAMEA3174300_1832 CDS
T04355
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
nwe
Neisseria weaveri
Pathway
nwe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nwe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SAMEA3174300_1832 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nwe03019
]
SAMEA3174300_1832 (recQ)
03400 DNA repair and recombination proteins [BR:
nwe03400
]
SAMEA3174300_1832 (recQ)
Enzymes [BR:
nwe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SAMEA3174300_1832 (recQ)
Messenger RNA biogenesis [BR:
nwe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SAMEA3174300_1832 (recQ)
DNA repair and recombination proteins [BR:
nwe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SAMEA3174300_1832 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
AAA_22
Motif
Other DBs
NCBI-ProteinID:
SAY51906
LinkDB
All DBs
Position
1:1963570..1965372
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AA seq
600 aa
AA seq
DB search
MTNPSARQILQGVFGYPEFRGRQEEIVETLAAGRSLMVLMPTGGGKSLCYQIPALMREGV
AVVVSPLIALMNDQVANLHAAGIHAACVHSGTSGEEARSIAESMETGRLKLLYVAPERLV
TERFLRFLDQHTVSLFAIDEAHCVSQWGHDFRPEYRQLGMLAQRYPHVPRVALTATADAA
TRADMKHYLGLENAAEFVASFDRPNIYYQVIEKNNGKKQLLDFIKKQAAGQSGIVYCLSR
KKVEDVAAFLCENGLDVIPYHAGLEMDVREANQKRFTREDGVIVVATVAFGMGIDKPDVR
FVAHLDMPQSVEHFYQESGRAGRDGLPAVSWLCYGLNDWVILRERIETGNSSAEQKQVEL
QKLDAMLSVCETADCRRVLLLKHFGEESEPCGHCDNCLHPPTRFDGTVPVQKLLSCVYRV
GQQFAAGYVINVLRGKTDDWIIGNRHHELSTFGIGDGLSDKEWRGVVRQCISLGYLTVNP
AHYQALQLTAAAKDVLKGRAQVWLRPLKRDKSATRTPQEAWLRTEREERIWQALRSWRKQ
RAQDGNVPAYVVFGDRTLRALVDKLPQTQEDLRDIYGMGEAKISEYGEEVLEICARFAHA
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgaccaacccgtctgcacgacagattttgcaaggtgtgttcggctaccccgaatttcgg
ggacggcaggaagaaattgtcgaaacgctggcagccggccgcagcctcatggtactgatg
ccgaccggcggcggtaaatctttgtgctaccagattcccgccttgatgcgcgaaggtgtg
gcggtggtggtatcgccgctgattgcgctgatgaacgatcaggtggccaacctgcatgcg
gcggggattcatgcggcttgcgtgcatagcggtacgtcgggcgaagaagcgcgcagtatt
gcggagagtatggaaacaggccgtctgaaattattgtatgtggcgccggagcgtttggta
accgagcggtttctccgttttctcgaccagcataccgtcagcctgtttgccattgacgag
gcgcattgcgtcagccagtgggggcacgatttccgccccgaataccgccagctcggtatg
ttggcgcagcgttatccccatgtgccgcgtgtggcgttgacggcaacggccgatgcggcc
acgcgggccgacatgaagcattatctcggtttggaaaatgcggcggaatttgtggccagt
ttcgaccgtccgaatatttattatcaggttatcgaaaaaaacaacggcaaaaagcagctg
ctcgatttcattaagaagcaggcggcagggcaaagcgggattgtatattgtctgagccgt
aaaaaagtggaagatgtggcggcgtttttgtgtgaaaacggtttggacgtcattccttat
catgccggtttggaaatggacgtgcgcgaagccaatcaaaagcgtttcacccgtgaggac
ggcgtgattgtggtggcgacggtggctttcggtatgggtatcgacaagcccgatgtgcgc
tttgtcgcccatttggatatgccgcagagcgtggagcatttttatcaggaatccgggcgc
gccgggcgggacggtttgccggcggtcagttggctgtgttacggcttgaacgattgggtg
attctgcgcgagcgtatcgaaacgggcaacagcagcgccgagcagaaacaggtggaattg
cagaaactcgatgccatgctgtcggtgtgcgaaaccgccgattgccgccgcgtgttgctg
ctcaagcatttcggtgaggagtccgagccgtgcggccattgcgacaactgcctgcatccg
ccgacccgttttgacggcacggtgccggtgcagaaactgttgagctgtgtgtatcgcgtc
gggcagcagtttgccgccggttatgtcatcaatgttttgcgcggcaaaaccgacgattgg
attatcggcaaccgccatcacgaactgtctaccttcggtatcggcgacggtttgagcgat
aaagaatggcgcggtgtcgtgcggcaatgtatcagcttgggctatctgaccgttaatcct
gcccattaccaagctttgcagctgactgctgcggccaaagacgtattgaaaggacgggcg
caggtttggctcagacctttgaaacgcgacaaatcggccacacgcacgccgcaggaagca
tggctccgtaccgaaagggaagagcggatttggcaggcgttgcgcagctggcgcaaacag
cgcgcccaagacggcaatgtgccggcttatgtggtgttcggcgacagaacgctgcgggct
ttggtggacaaactgccgcaaacgcaagaagatttgcgcgatatttacggtatgggcgaa
gcgaaaatcagtgaatacggcgaagaagtgctggaaatctgtgccagattcgctcatgct
tga
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