Nematolebias whitei (Rio pearlfish): 119407436
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Entry
119407436 CDS
T08042
Symbol
rad54l
Name
(RefSeq) DNA repair and recombination protein RAD54-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
119407436 (rad54l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nwh03400
]
119407436 (rad54l)
DNA repair and recombination proteins [BR:
nwh03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
119407436 (rad54l)
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Ortholog
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GFIT
Motif
Pfam:
Helicase_C
SNF2-rel_dom
HDA2-3
Motif
Other DBs
NCBI-GeneID:
119407436
NCBI-ProteinID:
XP_037530189
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Position
3:complement(24100720..24117726)
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AA seq
478 aa
AA seq
DB search
MRRSFAPSQVAKRKLAGPGGSGEDEDRNHKTIKRIRGDEVTQNQMSPCRTPLSQLNDINN
HEAFIQRILSKPFKVPIPNYTGTAQEFKKRFELPILKGRDADASDRDRQTGEDKLKELIG
IVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQTELYKLFLRQAKPLETLQEGSMSMSS
LSSITSLKKLCNHPALVYDRCVDGEEGFQGALDLFPPGFNIKAVEPQLSGKMLVLDYILA
ITRTTTSDKVVLVSNYTQTLDLFEKLCRHRRYLYVRLDGTMSIKKRAKIVERFNSAHSPE
FIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLATGT
IEEKILQRQAHKKALSSCVVDEEQDVERHFSLGELRELFTLNEGTTSDTHDKFRCRRCVN
GRQVKPPAEDSDCTCDLSQWNHCSDKKGLRDQVLKASWDAAVSFVFHQCSHEDHRQVV
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgagaaggagttttgctcccagtcaggtcgctaaacggaagctggcaggaccaggaggt
tcgggtgaagacgaagaccggaaccacaaaacgatcaagagaataaggggagacgaggtg
acacagaaccagatgtctccctgcaggacgcctctgagccagctgaacgacatcaacaat
catgaggcctttattcaaaggattctctctaagccgtttaaggttcctattcccaactac
acaggtacagctcaggagtttaagaagcgatttgaacttcccatactgaagggtcgggat
gcagacgccagcgacagagaccgacagacaggagaggacaaactcaaagagctgattggc
attgtcaacaggtgtttgataaggagaacgtcggatatcctgtcaaagtatctccctgtg
aaaattgaacaggttgtgtgctgcaggctgactcctctgcagactgaactctacaagctg
tttctgaggcaggccaaacccctggagactttacaagaaggctcaatgagcatgtcctcc
ctgtcctccatcacatccctcaagaagctctgcaatcacccggctcttgtctatgacagg
tgtgtggacggggaggagggatttcagggggctctggacctgtttcctccgggcttcaac
ataaaggctgtggaacctcagctctctggaaagatgctggttctggattatattctggca
attacacggaccacaacgagtgacaaggtggtgctggtctccaactacactcagaccctg
gacctgtttgaaaagctgtgcagacacagaagatacctgtatgttagactggatggcacc
atgtcaatcaagaaaagagccaagattgtggaaaggttcaacagtgcacatagccctgag
ttcattttcatgctgagcagcaaagctggaggatgtggcctgaatctgattggcgcaaac
cgtctggtgatgtttgaccctgactggaacccagccaacgatgagcaggccatggctcgt
gtgtggagagacggccagaagaaaacctgctacatctacagactgctggctactgggacc
atcgaggagaagatcctgcagagacaggcccacaagaaagccctgagcagctgtgtggta
gatgaggagcaggacgtggaacgtcacttctctctgggagaactccgagaactcttcacg
ctcaacgaagggacgaccagcgacacgcatgacaagttccgctgtcgtcgctgtgtgaat
ggcagacaggtgaaaccacctgcagaggactctgactgcacctgtgacctgtctcagtgg
aaccactgctcggacaagaagggcctgagggaccaagtactgaaggcatcctgggatgct
gccgtctcctttgtctttcaccagtgttctcatgaggaccacaggcaggttgtgtag
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