KEGG   Nematolebias whitei (Rio pearlfish): 119407495
Entry
119407495         CDS       T08042                                 
Name
(RefSeq) WD40 repeat-containing protein SMU1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
nwh  Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:nwh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:nwh03041]
    119407495
Spliceosome [BR:nwh03041]
 Complex B
  Other components
   Complex B specific factors
    119407495
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 Beta-prop_EML WD40_CDC20-Fz LisH_TPL Beta-prop_TEP1_2nd ANAPC4_WD40 WDR55 WD40_MABP1-WDR62_1st EIF3I WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd NBCH_WD40 Beta-prop_RIG_2nd Beta-prop_IFT140_1st Beta-prop_VPS8 Beta-prop_HPS5 WDR90_beta-prop_4th Beta-prop_SPT8 Beta-prop_WDR75_1st Beta-prop_DCAF4 Ge1_WD40 Beta-prop_IFT122_1st Beta-prop_Nup120_160 LisH Beta-prop_DCAF12 Beta-prop_SCAP Beta-prop_NWD2_C Beta-prop_WDR19_1st RMC1_N VPS8_N Beta-prop_IP5PC_F Beta-prop_NUP159_NUP214 DUF7165 WD_LRWD1 DUF2963 PD40
Other DBs
NCBI-GeneID: 119407495
NCBI-ProteinID: XP_037530248
LinkDB
Position
3:35764811..35773273
AA seq 332 aa
MAVELEPADVLRLIMQYLKENNLYRTLSTLQEETTVTLHTVESIESFIEDVNRGHWDSVL
LAIESLKLPDNTLIDLYEQVVMELIEMREVGAARSLLRQTDPMIMLKQTQPERYTHLDSL
LTCSYFDAREAYPKGSSKEKRRRAIAEALVREVSVVPPSRLIGLLEQVGNVRREQYPGHL
SANTTVDSPGSKEQHLEKETFPTQLYRHIKFGRRSHVECARFSPDGKYLITGSVDGFIEV
WNFNTGKISKDVKYQAQDGFMMMDDAVLALAFSHDSDLLASGAQNGKMKVWKVQSGLCVR
RFEHAHNKGVTCLSFSKDDSQILSASFDQTLR
NT seq 999 nt   +upstreamnt  +downstreamnt
atggctgtggagctggagcctgcagacgtgctccgcctcataatgcagtacttgaaggag
aacaacctgtaccgcacgctgagcaccttacaggaggaaaccaccgtcacgctccacacc
gtggaaagcatcgaaagcttcatcgaagacgtgaacagaggccactgggactcggttctg
ttggccatcgagtccctcaagctgcccgacaacactctcattgacctctacgagcaggtt
gtgatggagctgatagagatgagggaggtgggagccgcccgttctctcctcagacaaacc
gacccgatgattatgctgaagcagacccagccggagaggtacacccacctggacagttta
ctgacgtgctcatactttgacgctcgtgaggcgtacccgaaaggcagcagcaaagagaag
cggcgccgggcaatcgctgaggctttagtgagggaggtcagcgtggtgccgccgtcccgc
ctcatcgggctcctggaacaagtcggcaacgtgagacgagagcagtacccaggtcatctc
tccgccaacacgaccgtcgactcacctggcagcaaggagcaacatctggagaaagagacg
tttcccacacagctgtaccgccacataaagtttggacggaggtcgcatgtggaatgtgct
cgtttctcgcctgacggaaagtatttaatcaccgggtccgtggacggctttatagaggtc
tggaacttcaacaccgggaagatcagcaaggatgtgaagtaccaggcccaggacggcttc
atgatgatggatgacgccgtgctcgctctggccttcagtcacgactcggatctgctggca
tcgggagctcagaacggcaaaatgaaggtgtggaaggtccaaagcggcttgtgcgtgcgc
aggtttgagcacgctcacaacaaaggcgtgacctgtctgagtttctccaaggacgacagc
cagatcctcagcgcctcgtttgaccaaaccctgaggtga

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