Nematolebias whitei (Rio pearlfish): 119407515
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Entry
119407515 CDS
T08042
Symbol
zcchc7
Name
(RefSeq) zinc finger CCHC domain-containing protein 7
KO
K12597
protein AIR1/2
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119407515 (zcchc7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nwh03019
]
119407515 (zcchc7)
03016 Transfer RNA biogenesis [BR:
nwh03016
]
119407515 (zcchc7)
Messenger RNA biogenesis [BR:
nwh03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
119407515 (zcchc7)
Transfer RNA biogenesis [BR:
nwh03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
119407515 (zcchc7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCHC
zf-CCHC_4
zf-CCHC_2
zf-CCHC_3
AIR2-like_ZnK4
Motif
Other DBs
NCBI-GeneID:
119407515
NCBI-ProteinID:
XP_037530267
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All DBs
Position
3:complement(40279042..40384956)
Genome browser
AA seq
500 aa
AA seq
DB search
MHGGYETREEWEEKLYGDASSEDSLSFSELEFRLYSQLHYSSNAADLEELVDNEEKNDRP
SLENQQHDMLEAAGEGGSQMLLQKGSKHSSSNDDSLQQNKKKKQKNKTRATHQKSSPLLV
DFEEVIVIDSGPDVISISDDESSDEGICALKGQGSRKIQTSTPSQQKTQNRKRSPIVPMT
IASSSSASSESKLKSESDSTPESDSTPESDLNLGSESESSGSSDSDELENWMILGQGLLD
GDDSISLNLKGGSYNRTDACDEEEKGIWFVSERDKDAQIFNKGSGLRIQRVSNRYFTEKN
IHCRNCNKTGHLSKNCLESKKLLVCYLCGMVGHMAKACPSKHCTNCGHPGHSFESCREKA
YWHKHCNRCNMKGHNFDECPETWRQYNNMTTSGPPVSDPLKANKARSTAYCYNCSKKGHF
GFECVHKRMFSGVYPSSSLISHYDTVADIKRRRHRAQMKVNDVPDGHTPIVCDRQVPPHL
ERDASVNTDVTDITLPRGTA
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgcatggtggctacgagacccgcgaagagtgggaggagaagctctatggtgatgcaagc
tctgaagattcacttagcttcagtgaactggagtttcgtctctacagccagctccactac
tcttccaatgctgcagatttggaggaactggtggataatgaagaaaagaatgacagacca
agtctggaaaaccagcaacatgacatgctcgaagcagctggagagggtggaagtcaaatg
cttttacaaaaaggcagtaagcattcgtcatcgaatgacgacagcctccagcaaaacaaa
aagaagaaacagaagaataaaactcgcgccacacatcagaaatcatcaccattactggta
gattttgaggaggttattgtgatcgactccggtcctgatgtcatctcaatctctgatgac
gaatcttcggatgaggggatctgtgccctcaagggtcaaggttcacgcaaaatccagact
tcaactccgtcacaacagaaaacccagaacagaaaaagaagtcccatcgtgccaatgacc
attgcctccagcagttcagcatcttcagaatccaaactcaagtctgagtctgactcgact
cccgagtctgactcgactcccgagtctgacttgaatcttgggtcagagtctgaatcatca
ggttcatcggattcagatgagctggagaactggatgatactgggtcaagggttgctggat
ggagacgactctatctcactcaacctgaaaggaggttcttacaacagaacagatgcttgt
gacgaagaagaaaaaggcatttggtttgtttcagaaagagacaaggacgctcagatcttt
aataaaggcagcggtctcaggatacagcgggtgtcgaacagatacttcactgagaagaac
atccactgcagaaactgcaacaagaccggacatctctccaagaactgtctcgagagcaaa
aagctgttggtgtgttacctctgtggtatggtaggacacatggccaaagcatgtcccagc
aaacactgtaccaactgtggacatcctggacacagcttcgagtcctgccgggagaaggcc
tattggcacaaacattgcaatcgatgcaacatgaagggtcacaactttgatgaatgtcca
gaaacctggagacagtacaacaatatgactacaagtggccctcctgtgagtgaccctttg
aaggcgaacaaagctcggtctactgcctactgctacaactgctccaagaaaggacacttt
ggctttgagtgtgtacataagaggatgtttagtggggtttatccaagcagctcgctcatc
agtcactacgacaccgtggcggacattaaacgcagacgacaccgggcacaaatgaaggtt
aatgatgtgccggacggccacacacctatcgtttgtgacaggcaggtccctccccacctg
gagagggatgcgtctgtgaacactgacgtgactgacatcaccttgcccaggggaactgcc
tga
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