Nematolebias whitei (Rio pearlfish): 119407765
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Entry
119407765 CDS
T08042
Symbol
her6
Name
(RefSeq) hairy-related 6
KO
K06054
hairy and enhancer of split 1
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh03460
Fanconi anemia pathway
nwh04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
119407765 (her6)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
119407765 (her6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nwh03000
]
119407765 (her6)
03400 DNA repair and recombination proteins [BR:
nwh03400
]
119407765 (her6)
Transcription factors [BR:
nwh03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
119407765 (her6)
DNA repair and recombination proteins [BR:
nwh03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex binding factors
119407765 (her6)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Hairy_orange
HLH
bHLH_NCOA
Spectrin_1st_PEPL
Motif
Other DBs
NCBI-GeneID:
119407765
NCBI-ProteinID:
XP_037530510
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All DBs
Position
3:17607054..17608618
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AA seq
277 aa
AA seq
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MPADMMEKSSSSPVAATPASMNTTPDKPKTASEHRKSSKPIMEKRRRARINESLGQLKTL
ILDALKKDSSRHSKLEKADILEMTVKHLRNLQRAQMTAALNTDPTVLGKYRAGFSECMNE
VTRFLSTCEGVNTEVRTRLLGHLASCMTQINAMNYPSQHQHQHQLPPAAGPTHPSFGQSM
VQIPNSSPQVLPMNPVSCKGGSSPPTLPPDATKVYGGFQIVPATDGQFAFLIPNAAFAPN
GPVIPVYANNVSTPVPVPAAVSPGAPSANTDSVWRPW
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccgacatgatggaaaaatcttcatcctctccggttgctgcaactccggcaagc
atgaacacaactccggataaacccaagacagcgtctgagcatagaaagtcttcaaaaccg
attatggaaaagaggagaagagccagaatcaatgaaagcttgggtcagctgaaaactctc
atcctggatgccctgaaaaaagatagctccagacactctaaactggagaaggcggacatc
ctggagatgacggtcaaacacctccggaacctccagagggctcagatgacggctgcgctg
aacacagaccccaccgtcttgggaaaataccgcgcgggcttcagtgagtgcatgaatgaa
gtcacgcggtttctgtccacctgtgaaggcgtcaatactgaagtgaggacgcgcctcctg
ggccacttggccagctgcatgactcaaatcaacgccatgaattaccccagccagcatcag
caccagcatcaactgcctcccgccgccgggccaacgcatccctccttcggtcagtccatg
gtgcaaatccccaactcgtccccgcaggtcctgcccatgaacccggtgtcctgcaaaggg
ggctcctcgccgcccactttacctccagacgccaccaaagtgtacggcggctttcaaatc
gtgcctgccacggacggacagtttgctttcctcatacccaacgcggcgtttgcgccgaac
ggccccgtgatcccggtgtacgccaacaacgtcagcacgccggtgccggttccggctgcg
gtttcccctggagctccatcagccaacacggactcagtgtggagaccgtggtga
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