Nematolebias whitei (Rio pearlfish): 119407793
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Entry
119407793 CDS
T08042
Symbol
usp13
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
nwh01002
]
119407793 (usp13)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nwh04121
]
119407793 (usp13)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nwh04147
]
119407793 (usp13)
Enzymes [BR:
nwh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
119407793 (usp13)
Peptidases and inhibitors [BR:
nwh01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
119407793 (usp13)
Ubiquitin system [BR:
nwh04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
119407793 (usp13)
Exosome [BR:
nwh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
119407793 (usp13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UBA_7
UBA
zf-UBP_var
zf-UBP
UCH_1
UBA_DHX29
Motif
Other DBs
NCBI-GeneID:
119407793
NCBI-ProteinID:
XP_037530545
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All DBs
Position
3:19448731..19483373
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AA seq
863 aa
AA seq
DB search
MAADLGELLVPYMPTVRVPKTGDRVFKSECAFSFDSPESEGGLYVCMNTFLGFGREHVER
HYRKTGQSIYMHLKRHVRKKATGAAGGAIPRRRNGKVFLDLELNRDFNGDDYEYEDEAKL
VIFPDHFEIPLPNIEELPALVTIACDAVLNAPSAYKKQEPESWEEEIQVSRHARSLRQLD
NKVRIPPSGWKCQKCELKENLWLNLTDGSVLCGKWFFDGSGGNGHALEHYRETNYPLAVK
LDTITPDGADVYSFEEEEAVLDPHISEHLSHFGIDMLQMQKRTENGHHTDNNSRPRVSEW
EVIQESGMKLKAVFGSGYTGVKNLGNSCYLSTILQVLFSIPDFQRMYVGNLQRIFDYSPL
DPTQDFATQMAKLGHGLLSGQYSKPPMKSELIEQVMKEEHKVLNGHQQRGISPRMFKALV
GRGHLEFSSNRQQDAHEFLLHLINLVERNSAGSENPSDVFRFLVEERVQCCQSRRVRYSQ
RVDYCIQLPAPIEAATNREELLAYEAKRKEAEENIRALPEPVRARIPFTACLQAFTEPEN
VPDFWSSALQAKSAGVKTSRFASFPEYLIVQIKKFTFGVDWVPKKLDLAIDVPDFLDLSR
LRATGLQAGEEELPDLLPPIVLPEDSRDNSMSSSDSPEIDEAAVMQLAEMGFPLEACRKA
VYYTGNMGPEMAFNWIIAHMEEPDFAEPLTLPSMMDPGPPASDSTMGATPLGISPPEESV
AILTSMGFPRSHSINALKATNNNLERALDWIFIHPQEEESDTLSDMADTEPNDNAFSNTN
SHSDSTLSPDRDVSGPRVKDGPGRYELFAFISHMGASTMSGHYVCHIKKEGRWVIYNDHK
VCLSERPPKDLGYIYFYRRLSSS
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagacctgggagagctgctggtcccttacatgcccaccgtccgagtcccgaaa
acaggagacagggttttcaagagcgagtgtgccttctccttcgactctcccgaatctgag
ggaggcctgtatgtgtgcatgaacacattcctgggcttcggacgtgagcacgtggagaga
cattatcgcaaaacaggacagagcatttatatgcacctcaaacgacacgtcagaaagaaa
gccacaggagcagcaggaggcgctatccccagacgaaggaatgggaaagtgttcctagat
ttagagttaaaccgtgattttaatggagacgactacgaatacgaagatgaggccaagctc
gtcatttttccagaccacttcgagattcctttaccaaatattgaggagttgcctgctctg
gtgaccattgcttgtgacgcagtactcaacgcaccatcggcttacaagaaacaggagcct
gagtcctgggaggaggagatccaggtctccagacacgccagaagcctcagacaactggac
aacaaggttcgaattccacccagtggctggaaatgccagaaatgtgagctgaaagaaaac
ctgtggctgaacctgacagatggatcggtgctctgtgggaagtggttcttcgacgggagc
ggaggtaacggccacgctctggagcactacagagagaccaactaccccctggctgtgaaa
ctggacaccattaccccagacggagcagatgtttactcgttcgaggaggaggaagctgtg
ttggaccctcacatatcagaacacttgtcacactttggaatagacatgctacaaatgcag
aagagaacagaaaatgggcaccacacagacaataactcccgaccgcgggtcagtgagtgg
gaggtgatccaggagtcgggcatgaagctgaaggcggtgtttggttctggttacacgggc
gtcaagaacctgggcaacagctgctatctaagcacaatactgcaagtcctcttcagcatc
ccagacttccagaggatgtatgtaggtaatcttcaaaggatatttgactattcacccctt
gaccccacccaggacttcgccactcagatggctaaactgggacatgggctgctctcaggc
cagtactccaaacctcccatgaaatctgagctcattgaacaggtgatgaaagaagaacac
aaggtattaaacgggcaccagcagaggggcatctctcctcgaatgttcaaggccctagtt
ggcaggggacacctagagttttcctccaacagacaacaagatgcccacgagttcctcctg
cacctcatcaacctggtggagaggaacagtgccgggtctgagaatccaagcgatgttttc
cgcttcctggtggaggagagagttcagtgctgtcagtcacgacgggttcgttactctcag
agggttgactactgcatccagctgccggctcccatcgaggcagccaccaatcgagaggag
ctgctggcctatgaagccaagagaaaagaagctgaggagaacatacgggctctccctgaa
ccggtgcgagcacgcatccctttcactgcttgtctgcaggctttcacagaaccagaaaat
gtccctgacttctggagctcagcgctgcaggccaagtcagctggagtcaaaacttcccgt
tttgcctcgttcccagagtatctgattgtgcagatcaagaaattcacattcggtgttgac
tgggtgccaaagaaacttgacttggccatagatgttccagactttctggatctaagccgg
ctccgggccacagggctgcaggcaggcgaagaggagctgcctgacctcctgcctcccatc
gtgttgcctgaagactccagagataactccatgagctcatcagactctccggagatcgat
gaggcggcggttatgcagctggcagagatgggatttccactggaggcctgcaggaaggcg
gtgtactatactggcaacatgggccctgagatggccttcaattggatcatagcccacatg
gaggagcctgactttgcagaaccactcactctgccctccatgatggatcccggtcccccc
gccagcgacagcaccatgggggccacaccactgggaatctcgccccccgaggagagcgtc
gccatcctcacatcgatgggcttccctcgctctcacagcatcaatgcgctcaaagctaca
aacaataatctggaacgagcactcgactggatcttcatccacccacaggaagaggaaagc
gacaccctttcagacatggccgacacagagcccaatgacaacgccttctccaacaccaac
tctcacagcgactctacgctgtccccagacagagacgtgtcaggcccccgagtcaaagat
ggaccgggacgatatgaactctttgccttcatcagccacatgggagcatccacaatgtct
ggacattatgtttgtcacatcaaaaaggaaggaaggtgggtgatctacaacgaccacaaa
gtgtgtctgtcagaaaggcctccaaaagacttgggctacatctacttttaccgtcgactt
tctagcagttaa
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