Nematolebias whitei (Rio pearlfish): 119407800
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Entry
119407800 CDS
T08042
Symbol
mindy4
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase MINDY-4
KO
K22647
ubiquitin carboxyl-terminal hydrolase MINDY-3/4 [EC:
3.4.19.12
]
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nwh04121
]
119407800 (mindy4)
Enzymes [BR:
nwh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
119407800 (mindy4)
Ubiquitin system [BR:
nwh04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
MINDY
119407800 (mindy4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MINDY-3_4_CD
Motif
Other DBs
NCBI-GeneID:
119407800
NCBI-ProteinID:
XP_037530553
LinkDB
All DBs
Position
3:19818587..19824392
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AA seq
676 aa
AA seq
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MVASVEEVSSSLVREYLSRKGLKRTIACMDEEHPRTEASINNRSHLRSILNLDELYRKNK
VQNTPLKTLLEIIVKHHIEKLKNEELVGGECPQKVQTFSSPASKPVLISDSKAIEVRPDF
VSSKQRSDKNERCLPMPSYMSSLSEKERPSALNPTEDEIYKLDYQNDKLMLASQKDNGSF
VQKGTDRNTSIPAVTQKNRTNHIRRGMMAGPVPQESSKNRKRQSGKVEASQTLFRKDVEN
RQFTVLHSKSCVTDNSSASGAEGKLDLLNTTDINQDESSCGTMEQNVVKTNKVKTRSNSS
DLNVSEIRLDDIDDYDGDLRVVSVQRTVSEFHYSGCAIDQHTAAELKTILLGSSLNCFSV
EWLNQGFTFSETDDLRYGIVQKKGGPCGVLASIQAFVLKKLLFENTDSSISILQRLRPSS
STRRRCLVLALAEVLWRAGKEKQASVAINLGTSHFTPCGNYRSERVLEKMMYFSLDNIKD
LQFVLEQHIEQFETGMLGCILLIVSAVLSRSIERIREDMDVPTTTLIGAHGYCTQELVNL
LLCGRAVSNVFDDDMELDSGDGDLTLLKGIKDPCEVGLLSLFEHYNICKVGAYLKNPSFP
VWVVCSESHFCVLFGLQRELLTNQEGGLEFDLYYYDGLANQQEEIRLTVSVSKSAKSFQE
VDADLIPPLELCIRTR
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atggtcgcttctgttgaagaggtttcttcgtctcttgtaagggagtatttaagtcgaaag
ggactgaaaaggaccatcgcctgtatggatgaggagcacccacgcacagaggccagtatc
aataacagatcccatctgaggagtattcttaacctggatgagctctacagaaaaaataaa
gttcaaaatacccccctgaaaacattacttgagattattgtgaagcatcatattgaaaag
ttaaaaaatgaagagctcgtgggaggagaatgtccacagaaagtccaaactttcagctca
cctgcaagcaaaccagtactgataagcgactcaaaagcaattgaagtacgaccagatttt
gttagcagcaagcagaggtctgacaaaaatgaaagatgcctccctatgccatcatatatg
tcatcattgtctgagaaagagaggccgtctgctttgaatccaacagaggacgagatttat
aaactagattaccaaaacgacaaacttatgttggcttcccaaaaggacaatgggagcttt
gtccaaaaggggacagacagaaacacttccatccctgctgttacccagaagaatagaaca
aatcacatcagacgaggcatgatggctggaccggtaccacaggaatcaagcaaaaacaga
aaaaggcaaagtggaaaggttgaagcatcccagacgctgttcagaaaagatgtggaaaac
aggcagtttaccgttttgcattcaaaaagttgtgtaactgacaacagctcagccagcggt
gcagaaggaaaactggatctcctgaacacaacagatataaaccaggatgagagcagttgt
ggaacaatggaacaaaatgtagtgaaaacaaacaaagtaaagacgagatcaaacagttct
gatttgaatgtctcggagataagattagatgatattgatgattatgatggtgatctgcga
gtagtgtctgttcagaggactgtttcagagtttcactactcaggctgtgcaatagaccaa
cacacggccgcagaattgaaaacaatacttcttggttccagcctaaattgttttagtgtt
gagtggctgaatcagggttttaccttttctgagacagatgacctcagatatggcattgtg
cagaaaaagggtggtccttgtggagttctggcatctattcaagcatttgttcttaagaaa
cttctgtttgaaaacactgatagtagtatatccatccttcagaggttacgaccgtccagc
agcaccagaagacggtgtcttgttttagctctggctgaagtcttgtggagggctggcaag
gaaaaacaagcctcagttgcaataaatttggggacaagccatttcaccccatgtgggaac
tacagatctgaaagagtacttgaaaagatgatgtatttctctctggacaacatcaaggat
ctgcagtttgttctggagcagcatatcgagcagtttgaaactgggatgttaggatgtatt
ctactgattgtatcagcagttctctctcgatccattgaaagaataagagaagatatggac
gtgcccaccaccacattaattggggcccatggctactgcactcaggagctggtcaatctg
ttgctttgtggacgagcggtttctaatgtttttgacgacgacatggagctggactccggc
gatggtgacctgactctccttaaagggatcaaagacccctgtgaagttggtctgctctcc
ctgtttgaacattataatatctgtaaggtaggggcttacctgaagaatccctccttccct
gtctgggtggtgtgcagtgagagccacttctgtgtgctgtttggcctgcagagggagctg
ttgaccaaccaggaaggaggtctggagtttgacctctattactatgatggactggccaat
cagcaggaggagatccgcctcaccgtttctgttagcaaatcagctaaaagctttcaggaa
gttgatgctgatcttattcctccacttgagctttgtatccgcacaaggtaa
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integrated database retrieval system
