Nematolebias whitei (Rio pearlfish): 119407805
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Entry
119407805 CDS
T08042
Symbol
rnf220b
Name
(RefSeq) E3 ubiquitin-protein ligase RNF220
KO
K25174
E3 ubiquitin-protein ligase RNF220 [EC:
2.3.2.27
]
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nwh04121
]
119407805 (rnf220b)
Enzymes [BR:
nwh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119407805 (rnf220b)
Ubiquitin system [BR:
nwh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119407805 (rnf220b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNF220
zf-C3HC4_2
zf-C3HC4_3
zf-RING_5
zf-C3HC4
zf-RING_2
Pox_A_type_inc
Endonuclease_7
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
119407805
NCBI-ProteinID:
XP_037530558
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All DBs
Position
3:complement(19924102..19963378)
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AA seq
552 aa
AA seq
DB search
MDLHRPFKMDSPSYLPAPLASPALMVLASTAEAGRDASVPCQAPRPFGVPISVEKDLHLP
FPSASYTFTSLYQRQAPMSGTFPSRDFPTSLLHLHPQFTPPNLDCPTLGMLNHSGVGAFR
PFASPQDEREPGGYQSAFTPAKRLKSCFPDMEGKEFDFGSLKAGEETGRKLFSMSGLLSD
GEASSSPEERKEHSKVKGLYDSQAPVCPVCQAVLRPSELQDHMEQELAKLAQLQISITPV
QHDHIMRTPKSLSLSLHIKREGGCPTSPPQPSEEHHSDRYQTFLRVRANRHTRLNVDDLC
WCRCYVKSALLRPHSAGAHLDCTQTVRIGKLKRRKPEDLQEGSADLVPLEDEWNERRRIQ
MTSVGFKGAALGSITSKECRDSDADLDVDGDDTLEYGRAQYSETDVIPCSGESSKVSAVN
SSLVPDSRLHFDFSKLSNDGSPSTSSAEKQAGSTACLPKTCKNTEIETLSEDSTLTTLDA
LKARIRDLEKQLSKGDRFKCLICMDTYTTPLTSIQCWHVHCEECWLRTLGAKKLCPQCNT
ITSPGDLRRVYL
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggacctccaccgccccttcaagatggacagtccctcctacctgccagctccactggcc
tccccagccctaatggtgctagcttccactgctgaagctggccgagatgcttctgtcccc
tgccaggcccccagacccttcggtgtccccatctctgtagaaaaagacctccacctacct
ttcccttcagcctcctacacctttacctccctgtaccagcggcaggcccctatgtcaggc
actttcccgtcccgagactttccgacctccctgctccatctccaccctcagttcacccca
ccgaacctggactgcccgactctgggcatgcttaaccacagcggggtgggcgccttccgg
cctttcgcttccccacaagatgagagggaacctggaggttaccagtcagccttcactccc
gccaagaggctgaagagctgctttcctgacatggaggggaaggaatttgactttggttcc
ttgaaggccggtgaggagacagggagaaagttgttctccatgtctggcctgctgtctgat
ggagaggcttcgtcgagcccagaggagcgtaaagagcacagcaaagtgaagggtctgtat
gactcccaggcgccagtctgcccagtctgtcaggccgtcctgcggcccagtgagctgcag
gatcacatggagcaggagttagccaaactcgctcagctgcagatcagtatcactccagtg
caacatgaccacatcatgaggacgccgaagtctttgtccctctctctgcatatcaaacga
gaaggaggctgtcccacatcacctcctcaaccgtctgaggagcaccactcagatcgatac
cagacatttctccgagtgcgggccaacagacacacgagactaaacgtcgatgacctctgc
tggtgcaggtgctacgtcaaatctgccctactgcgcccacacagcgcaggagcccaccta
gactgcacacaaactgtcaggatcggaaagctgaagaggagaaaaccagaagatctgcag
gagggttcggcagacttggtgccactggaggacgagtggaatgagaggagacggatacag
atgacatctgtagggtttaaaggtgcagcattgggaagcataacttctaaagagtgtcgg
gacagcgacgctgaccttgatgttgacggagacgacacgctggagtacggccgagcgcaa
tactcagagacggatgtaatcccgtgttcaggagaaagctccaaggtgtcagcagtgaac
agcagcttggtgcctgattccagacttcactttgacttttcaaaactgtcgaacgatggg
agtccatcaacaagcagtgcagagaaacaagctggcagcacagcctgtctcccaaaaacc
tgcaaaaacaccgagatcgagacgctttcagaggattccacgttgacaacgctggacgca
cttaaagctcggatacgagatttggagaaacagctgtctaaaggagacagatttaaatgc
ctcatctgcatggacacgtacaccactccgctcacctccatccagtgctggcacgttcac
tgtgaggagtgttggctgcgaacgctgggagcaaagaagttgtgtccacagtgcaacacc
atcacctcacctggagacctgaggcgggtctacctctaa
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