Nematolebias whitei (Rio pearlfish): 119407811
Help
Entry
119407811 CDS
T08042
Symbol
lsm7
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh03018
RNA degradation
nwh03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119407811 (lsm7)
09123 Folding, sorting and degradation
03018 RNA degradation
119407811 (lsm7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nwh03019
]
119407811 (lsm7)
03041 Spliceosome [BR:
nwh03041
]
119407811 (lsm7)
Messenger RNA biogenesis [BR:
nwh03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
119407811 (lsm7)
mRNA degradation factors
5'-3' decay
Lsm complex
119407811 (lsm7)
Spliceosome [BR:
nwh03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
119407811 (lsm7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
InhA-like_MAM
DUF150_C
Motif
Other DBs
NCBI-GeneID:
119407811
NCBI-ProteinID:
XP_037530565
LinkDB
All DBs
Position
3:20207711..20209641
Genome browser
AA seq
103 aa
AA seq
DB search
MADKEKKKKESIFDLSKYIDKTIRVKFQGGREASGVLKGFDPLLNLVLDGTIEYMRDPDD
QLKLTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFIQQQDG
NT seq
312 nt
NT seq
+upstream
nt +downstream
nt
atggcggataaagaaaaaaagaagaaggagagcatcttcgacttgtccaaatacatcgac
aagacgattcgtgttaagtttcaaggaggccgagaagccagcggggtcctgaaaggattt
gatcctcttctgaacctggtgctggacggcacaatcgagtacatgcgtgatccagatgac
cagttaaagctgacagaagacacccgacagttggggctggtggtctgcagaggaacctcc
gtagtgctgatctgtcctcaggatggcatggaggccattccaaacccattcatccagcag
caagatggataa
DBGET
integrated database retrieval system
