Nematolebias whitei (Rio pearlfish): 119407829
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Entry
119407829 CDS
T08042
Symbol
sin3b
Name
(RefSeq) paired amphipathic helix protein Sin3b
KO
K23213
paired amphipathic helix protein Sin3b
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nwh03036
]
119407829 (sin3b)
Chromosome and associated proteins [BR:
nwh03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
119407829 (sin3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
At4g15545_C
mTOR_dom
Motif
Other DBs
NCBI-GeneID:
119407829
NCBI-ProteinID:
XP_037530586
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All DBs
Position
3:20827665..20843701
Genome browser
AA seq
1265 aa
AA seq
DB search
MAKIQAHSTAKQINQIQDKPYVITQKQVQQQHFQKLKVEDALSYLDQVKIRFANDPGIYN
KFLDIMKEFKSQSIDTPGVINRVSQLFHGHPDLVLGFNAFLPPGYRIEVPKNGMAFLQSP
FSTQVSPGQQGKSLTTTPVAATSGPVPAVHTEAGPVQTSEVKAVSSESLSSPSTGPPEPP
SKLSLPLTTRESQNQATTSSVSPPASETSPVEFDSAISYVNKIKNRFLDHPEIYRAFLEI
LHTYQKEQLEVKESRGSRSSSGMTEDEVFSKVANLFKGQEDLLAEFGQFLPDAKRSLFTG
SSLTGGKEQVKKLEEEDPITKQNKKRPRPLLMHMSPLLKKKMRYTCTKDQSFASVGKHGV
LREFSFFDKVRRLFKSQEVYENFLRCIALFNQEVVSGAELLQLVTPFLGKFPELYTQFKS
FLGDKELTHAVSGLSDRYMEGGGGREVDYASCKRLGSSYRALPKTYQQPKCSGRTALCKE
VLNDTWVSFPSWSEDSTFVSSKKTPYEEQLHRCEDERFELDVVLETNLATIRVLESVQKK
LSRLSPEDQERFRLDDCLGGTSEVIQRRAVYRIYGDKAPEIIEGLKRSPVTAVPVVLKRL
KAKEEEWREAQQGFNKIWREQYEKAYLKSLDHQGVNFKQNDMKALRSKSLLNEIESIYDE
RQEQSTEEGGVGHQGRNGSGSAAPSEPHMMFTYEDKQILEDAASLIIYHVKRQPAIHKDD
KDHIKRIIKHFVPDLFFARRGELSDAEDWTDEEVEPEEAGERGGGTSTGGGGNGNSSNGS
VGVAAMGSQTQPQVAQTQSQPQQQLNGESRRRRCSLSQSTETEPCSTSSSTSQPAGTITS
TPGPIPMEMGSSVPGERVDLRDPEAEHQKELDGVYNLFFVNNNWYFFLRLHQTLCSRLLR
VYRQAERQLLEHRAEQSRERLLMTEGRREKACDLAMELRLKEPSEVELEEYYPAFLDMVR
SLLDGNLDSTQYEDTLREMFTIHAYIGFTIDKVIHNIIRQLQHLVSDEVCLQVVDLYLAE
RKRGAAGGNLSSQCVRAAWETSYQWKAERIMAEENCFKVMFIQNKGQVTMTIELLDTEEA
QADDPLDVQCLSSYMEQFVGTESSLCCQAEGYFFKPVFLPRNLRRFRRWQVRQVEAMRCR
REWHRQLAVENAGSLDCRFKLNTHKMVFVMNSEDYMYRRGALVKARKSQHGVAASQHEHF
DKWHQSWLSDHVTASAERSVHNWLMGEEEEDFIPCKTICLSTEVKGQMVNRYQVHYSSSK
APSSP
NT seq
3798 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagattcaagcgcacagcaccgccaagcaaataaaccaaattcaagacaagcct
tacgttataacacaaaagcaagtgcagcagcagcacttccagaagctgaaggttgaagat
gccttgtcgtacttggatcaagtcaaaattcgttttgcaaatgatcctggtatatacaac
aagtttctcgacatcatgaaagagttcaagtcacaaagtatcgacacacctggggtcata
aaccgtgtgtcccagctatttcatggacacccagacctggtcttgggctttaatgccttt
ctgccacccggttatcggatagaggttcccaagaatgggatggccttccttcagtctccc
ttctccacacaggtatccccaggacagcaggggaagagcctgaccaccactccagtagct
gcaacctcaggccctgttcctgctgttcacactgaagcaggaccagtccagaccagtgaa
gttaaggcagtctcatcagagtccctatcctcaccctcaacaggacctccagaaccaccc
agcaaactttctctccccttgactaccagagaaagccagaatcaagccaccacctcatcc
gtatccccacctgcttcagagacgagccccgtcgaatttgacagtgccatcagttatgta
aacaagattaaaaaccgtttcctggaccacccagagatttacagagccttcctagaaatt
cttcacacataccagaaagagcagctggaggtgaaggagagtcgtggtagccgaagcagt
agtgggatgaccgaagatgaggtgttttccaaagttgccaatctcttcaagggacaggag
gacctacttgctgagtttggacagtttttgcctgatgccaagcggtcactgtttacaggg
agttcgctgacgggggggaaggagcaggtgaaaaaattggaggaagaagacccgattacc
aaacagaacaaaaagaggcccaggccattactcatgcacatgtccccactgctgaagaaa
aaaatgaggtatacctgcaccaaagatcagtcctttgcttctgttgggaaacatggtgtc
ttaagagaattctccttctttgataaggttcgtcgcctgtttaaaagtcaagaagtgtac
gagaacttcctacgatgcatcgccctgttcaaccaggaagtagtttctggagcagagctg
ctgcagctggtcacacctttcctggggaagtttcctgagctgtacacacagttcaagtca
tttctgggggacaaagagctcactcatgctgtgtcggggctgtcggatcgttacatggaa
gggggagggggcagggaggtggattacgcatcttgcaagcgccttgggtccagttataga
gcattgcctaaaacataccagcagcccaaatgcagtgggcgcaccgccctttgcaaagag
gtattgaacgacacttgggtgtcatttccctcctggtcagaggattccacctttgttagc
tcgaagaaaactccatatgaggaacagctgcatcgctgtgaggatgaaagatttgagctg
gatgttgttctggagacaaatttggccaccatcagggtgttggagagcgtacagaagaag
ctgtctcgcctgtctccagaggaccaggagagattcagattagacgactgcctgggcggc
acctcagaagtcatccagcgccgtgccgtatatcgtatctatggcgacaaagcccccgag
atcattgagggactgaagagaagtcctgtcaccgctgtgcccgtggtgctgaagagattg
aaagctaaggaggaggagtggagagaggcccagcagggtttcaataagatttggagggag
cagtatgagaaggcctacctgaaatccctcgaccaccaaggggtcaacttcaaacagaac
gacatgaaggccctgcggtcaaagagtcttctcaatgagattgaaagcatctatgatgag
cgtcaggaacagagcacagaagaaggtggggttggtcatcaaggccgtaatggttctggc
tcagctgcacccagtgaacctcacatgatgtttacatacgaggataagcagattcttgaa
gacgctgcctccctcatcatctaccatgtcaaacgtcagcccgccatccacaaggacgac
aaggaccacattaagcgcattatcaagcactttgttcctgacctgttctttgctcgacgc
ggcgagctcagtgatgcagaagactggacagatgaggaggtggagcctgaggaagcagga
gaaagaggaggaggaacttcaacaggaggagggggaaatggtaactcgagtaatggatca
gtaggagtagcagccatgggaagtcagactcaacctcaggtagctcagacccagtcccag
ccgcagcagcaactcaatggtgagtccagaaggaggcgctgcagcctgtcgcaatccaca
gagaccgaaccctgttccacctccagcagcacaagccaacctgcagggactattacatcc
actcctggccctatacccatggagatgggttcaagtgtgcctggggagagagtggacctt
cgtgaccctgaagcagaacaccagaaggagctggatggagtttacaaccttttctttgtc
aacaacaactggtatttctttttgcgactgcaccagactttgtgttcaagattgctgcgg
gtttaccggcaggctgaacgtcagctgttggagcacagagcggagcagagccgagagagg
ctactgatgacggaaggaaggagagaaaaggcttgtgacctagccatggagctccgcctc
aaagagcccagtgaggtggaattggaggagtactacccagccttcttggatatggtgcgc
agtctcctggatggtaacctggactcaacgcagtatgaagacacgttgagagagatgttc
accatccacgcctacattggcttcactatcgacaaagtcatccacaacatcatccggcag
ctacagcacctggtgagcgacgaggtgtgtctgcaggtggttgatctttacctggctgag
aggaagcgtggggcagcaggtgggaatttgtcctctcagtgtgttagagcagcttgggag
acgagctatcagtggaaagctgagagaatcatggctgaggagaactgcttcaaggtgatg
tttattcaaaacaagggtcaagtgacgatgaccattgagctgttggacactgaagaagct
caggcagatgatccactagatgttcagtgcctgtcaagctacatggagcagtttgtagga
acagagtccagtctgtgctgtcaagcagagggctacttcttcaaacctgtttttctgccc
aggaacctgcgccgtttccgccgctggcaggtgcggcaggttgaagcgatgcgctgcagg
agggagtggcaccgccagctggctgtggaaaacgccggcagtctggactgccgatttaaa
ctcaacactcacaagatggtgtttgtcatgaactctgaggactacatgtaccgtcgaggg
gcgctggtcaaggccaggaagtcgcagcacggagtggcagcgagccaacatgaacacttt
gacaagtggcaccagagctggctgtccgatcacgtcacggcttcagccgaacgctcggtg
cacaactggctaatgggcgaggaggaagaggacttcatcccctgcaagactatctgcctg
tccacagaggtgaaaggacagatggtcaacagataccaagttcattacagcagtagcaaa
gccccctcctcaccttaa
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