Nematolebias whitei (Rio pearlfish): 119407928
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Entry
119407928 CDS
T08042
Symbol
rorca
Name
(RefSeq) RAR-related orphan receptor C a
KO
K08533
RAR-related orphan receptor beta
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nwh03000
]
119407928 (rorca)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
nwh03310
]
119407928 (rorca)
Transcription factors [BR:
nwh03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
119407928 (rorca)
Nuclear receptors [BR:
nwh03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
119407928 (rorca)
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
119407928
NCBI-ProteinID:
XP_037530688
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Position
3:complement(27696585..27709546)
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AA seq
395 aa
AA seq
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MRAQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNAMYSCSRQRNCLIDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKLRDSLYAEVQKHQQSQECAGVGAREDNSEVAD
HNCTYRRGSSAALSDLDDITTLPEGLLFDLPLTPEDGGGEYCNLDMLGGSAGSSSSSQSS
PEQNSLDFADGNNSIKHEYQLLHDSGLFSHAILNPVPEGCSLLEIERITQSVMKSHVETS
QYSTEELKRMAWSLYSTEETRSYQTKSAEVMWQQCAMHITNAIQYIVEFAKRISGFMDLC
QNDQIILLKAGCMDVLLIRMCRAYNPINNTLLFNGKFATPQLFKALGCDDLVSAVFDFAK
NLSRIQMSEEEMALFSAAVLLSPDRQWLTDAQKIG
NT seq
1184 nt
NT seq
+upstream
nt +downstream
nt
atgagagctcaaatagaaataattccttgtaaaatctgtggggacaaatcatcaggcatt
cactacggtgtcatcacctgtgagggctgcaagggcttttttcggcgcagccagcaaaac
aatgctatgtactcgtgctcacggcagaggaactgcctcattgaccggaccaaccgtaat
cgctgtcagcactgcaggctgcagaaatgtctcgcactcggcatgagccgcgatgctgtg
aagtttggtcgcatgtccaaaaagctgcgtgacagcctgtacgcagaggtccagaaacac
caacagtcccaggagtgtgccggagtcggtgcccgcgaggacaacagtgaagtggccgac
cacaactgcacgtacaggagaggctccagcgcggccctcagcgacctggatgacatcacc
accctgcctgaaggcttgcttttcgacctgccgctgacaccggaagatggcgggggagag
tactgtaacctggacatgctgggaggaagtgcaggcagcagctcatcctctcaaagctca
ccggagcagaacagcttggactttgctgatgggaacaacagtatcaagcacgagtaccaa
ttgttgcacgattctggactcttctcacacgcaatcctcaaccctgtgccagagggctgc
tccctgctggagatagagcgtataacccagagtgtgatgaagtcccacgttgagacaagc
cagtacagcacagaggagctgaagaggatggcatggagcttgtacagcacagaagaaacc
cgctcgtaccaaaccaagtcagctgaggtgatgtggcagcagtgtgccatgcacatcacc
aatgcaatccagtatatagtggagtttgcaaagcgcatctctggattcatggacctctgt
cagaatgatcagattatcctcctcaaagcaggctgcatggacgttcttctgatccgtatg
tgccgggcctacaaccccatcaacaatacgttgctcttcaatggaaagtttgccactcct
cagctttttaaagctcttggttgcgacgaccttgtgagtgcagtgttcgacttcgccaaa
aatctgagccgtatccagatgtctgaggaggagatggcgcttttcagtgctgccgtgctg
ctgtcaccagaccgacaatggctgacagatgcccagaagatcgg
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