Nematolebias whitei (Rio pearlfish): 119407956
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Entry
119407956 CDS
T08042
Symbol
si:dkey-110c1.10
Name
(RefSeq) unconventional myosin-Vb
KO
K10357
myosin V
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
119407956 (si:dkey-110c1.10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nwh03019
]
119407956 (si:dkey-110c1.10)
04131 Membrane trafficking [BR:
nwh04131
]
119407956 (si:dkey-110c1.10)
03029 Mitochondrial biogenesis [BR:
nwh03029
]
119407956 (si:dkey-110c1.10)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
nwh04812
]
119407956 (si:dkey-110c1.10)
Messenger RNA biogenesis [BR:
nwh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
119407956 (si:dkey-110c1.10)
mRNA cycle factors
P-body specific factors
119407956 (si:dkey-110c1.10)
Membrane trafficking [BR:
nwh04131
]
Others
Actin-binding proteins
Myosins
119407956 (si:dkey-110c1.10)
Mitochondrial biogenesis [BR:
nwh03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
119407956 (si:dkey-110c1.10)
Cytoskeleton proteins [BR:
nwh04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
119407956 (si:dkey-110c1.10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
nSTAND3
Myosin_N
AAA_22
AAA_16
Motif
Other DBs
NCBI-GeneID:
119407956
NCBI-ProteinID:
XP_037530718
LinkDB
All DBs
Position
3:29103605..29127007
Genome browser
AA seq
1662 aa
AA seq
DB search
MATLELYTKGASVWVPDPESVWVSAQLLQNFKPGEKQLLLRLHDGNEVHHPVGSLSDLPL
LGNPDILEGENDLTALSFLHEPAVLHNLRVRFLDYSSIYTYCGIVLVAINPYEQLPIYGE
EVIDAYSGQDMADMEPHIFSVAEEAYRTMTREEKNQSIIISGESGSGKTVSAKFTMRYFA
VVGGAAQQTSVEERVLASNPIMESMGNAKTTRNDNSSRFGKYIEIGFGRKGDIIGANMRT
YLLEKSRVVFQASSERNYHIFYQLCASRDLPEMRALRLNAPGHFRYTNQGGDEQIPGTDD
LSDLEHTRNAFTTLGVLPDQQMELFRIISAVLHLGNVNIQASGRSSDRSYIDAEDHALAV
FSKLLGVERSQMAHWLCHRRLTVGGEMLVKPITGQQAQEARDALAKHIYGQLFIWTVQRL
NSALRSQRSKAKSFIGVLDIYGFETFQWNSFEQFCINYANEKLQQQFNRHVFHLEQEEYV
REELAWNRIEFSDNQQCINLIEGQLGMFDLLDEECRMPKGSDESWVLKLYDQHLTSKPHA
HFKKPRMSNSAFIILHFADTVQYECSGFLDKNRDTVFEELINILKASQSELVAELFQLQG
NAPFVANGSVRSGKRATREHKLTVGFQFRQSLQMLMDTLNSTTPHYIRCIKPNDLKEAFM
FDPKRTVQQLRACGVLETIRISAAGYPSRWTYEEFFSRYRILLRGPQNQAQAQALCRRYL
PELIPDADQYCFGKTKVFFRAGQVALLERLRSERLRAAAVIIQSRVKGWLGRVKYSRVRW
AAGTIQRFSRGTLARRLALTLRYTKAALVLQKTFRMLLVRRLFLVIRQATVTIQAFTRGT
LARRRHSQLVAERAAVLLQARVRGWLAKRAYRRVRAAVVFMQCCVRRKASRRELLKLKAE
ARSVERYRELNKGMEVKLMQLQLRVDQEVRQSAALNETLSAEREAASVELEALRSIIQKL
ENQKQEKLPTGPVVSEKEVEERRRAEEKAAQKILRLTEELQTLQKEKDDVYIEKMDVSAR
LLEQEKTQQECVRQAVLQASAALRSELDEEKMKYQGLLKDFTRLEQRYDNLREMSLLSER
GKGHRRTDSSQSLIFEPLSPSSTPLSPQSLTPLSLSPFPSAFPSPEAVRRISVTSPTEER
RHSVWSSDTQMEQLMEKMDVPKDPAVKMKREDLELAYDAVRVANKFLERQLRQQHHGWEE
ELNALRSQLSQAAMCSSSAAQAQDLWELLEAREQECVRLRRELKELKTTVSLRRLLSHVF
PSALTTEVCCPPQLKPAAVSSSLECRKRDETKLIKNLITDIRADVALSLPPGLPARILFL
CVRQADCSGDQGRARSLCSAAVTAMKAVTKKHINDLHMTALWLENVCLLHDLLVQHSPKQ
SLDPDELVPLTFDLSDLIRSLSDLCIQSYQQLLCITETHLQKLIVPALLESETIAGLSSS
AVKMGVSRKRAGSDPKPVGAEAPTMAPVLRELGALHTALLHQALPQSLMEQAFRQLTHFI
CACTLNNLLLRKDMCCWSRGLQIRYNVSLLEEWLRSRGLQAGGIMTTLEPLIQAAQLLQV
GKKTDADAQAIVHTCTALSSKQIVKILTLYTPHSGLDEKVSLNFIRTVQELLRGCSDSQP
PQLLVDVRRAFPVTFPYSPPPVVSAEGLVIPDSLKISFLHRA
NT seq
4989 nt
NT seq
+upstream
nt +downstream
nt
atggcgactcttgagctgtacaccaagggggcgagtgtgtgggtccctgatccagaatca
gtttgggtttcagctcagctcctgcagaacttcaaacctggagagaaacagcttctgctg
cgactccatgatggaaatgaggtccatcacccagtgggttctctgtctgacctccccctg
ctggggaaccctgacatcctggagggtgagaacgacctgacagctctcagctttctccat
gaacctgctgtgctgcacaacctgcgggtgcgctttctggactacagcagcatctacacg
tactgtggtatcgtgttagtggccattaatccgtacgagcagctgcccatatacggtgag
gaggtgatcgatgcgtacagcggtcaggacatggctgacatggagccgcacatcttttct
gtggcggaggaagcctaccgcaccatgaccagagaggagaagaaccagtccatcatcatc
agtggggagtctggttcagggaaaacggtctcagccaaattcaccatgagatactttgct
gtggttggaggtgcagcacagcagaccagcgtggaagagagggtcctggcttcaaacccc
atcatggagtctatgggaaatgctaaaaccacccgaaatgacaacagcagtcgttttggg
aagtacattgaaattggctttggcaggaagggggacatcatcggggccaacatgagaact
tatctgctggaaaagtcaagggtcgttttccaggcgtcatcagagagaaactaccacatc
ttctatcagctgtgtgcatccagagatctgcctgaaatgagagcactcagactcaacgca
ccgggacatttccgctacaccaaccagggaggggacgagcagatacctggcactgatgat
ttgtctgacctggagcacactcgcaatgctttcaccactctcggtgtgcttcctgaccag
cagatggagctcttcaggatcatttcggctgttcttcacctgggaaatgttaacattcaa
gccagtgggaggagttcggacaggagttacatagatgcagaggaccacgctctggctgtg
ttctccaagctgttgggagttgaaagatctcagatggctcactggctgtgccaccgcaga
ctcacagtaggaggagagatgctggtgaaacctataactggtcaacaggctcaagaagcc
agagacgcacttgcaaaacacatctacggccagctgttcatatggaccgtccagaggctc
aactctgccctgcgcagccagaggtcaaaggccaaatcctttataggggtgctggatatc
tacgggtttgagacttttcagtggaacagtttcgaacagttctgtataaactatgcaaat
gagaagcttcagcagcagtttaaccggcacgtgttccacttggagcaggaggagtacgtg
cgtgaggagctggcctggaacaggattgaattcagcgacaaccagcagtgcatcaacctc
atcgaggggcagctgggaatgtttgatttgttagatgaggagtgcaggatgccaaaaggt
tcagatgaaagctgggtcctcaaactgtacgaccaacacctgaccagtaaaccccacgct
cacttcaaaaaacctcgcatgtccaacagcgccttcatcattctgcacttcgctgacacg
gtgcagtatgaatgctctggctttttggacaaaaatcgagacacagtctttgaggagctc
attaacattctcaaagcaagtcagtctgaattggtggctgagttgttccagctgcaggga
aacgctcccttcgtagccaatgggagcgttcgttcagggaaaagagcaaccagagaacat
aaactcacagtaggcttccagttccgtcaatccttacagatgttaatggacactcttaac
agcaccacccctcactacatccgctgtattaaacccaatgacctaaaagaagcttttatg
tttgaccctaagaggactgtgcagcagctgagagcatgcggagtgctggagactattcgg
atcagtgctgcaggttatccatccagatggacgtatgaggagttcttcagcaggtaccga
attcttcttcgggggcctcaaaaccaggcccaggcccaggctttgtgcagacggtacctg
cctgagctcattccagacgcagatcagtactgctttgggaagaccaaagtatttttccga
gcaggtcaggtggcgcttctagagaggctgaggtctgagcggctgcgagcggctgctgtg
atcatccaaagtcgagtcaaaggatggctgggacgggtcaaatacagcagggtccgctgg
gcagctggaaccatacagcggttcagcaggggaactctggcccgacgtttggctctgacg
ctgcgctacaccaaggctgctctggtgctccagaagacctttcgtatgctgctggtccga
cggcttttcctcgtgatccgacaggccaccgtcaccatccaagccttcaccaggggaacg
ctggcgcgccgcagacacagtcagctggtggcagagagggctgctgtgctgctccaggcc
agagtacgggggtggctggcaaagcgggcgtacaggcgtgtgcgtgcggcggtggtgttt
atgcagtgctgcgtgcgccgtaaggccagcaggagggagctgctgaagctgaaggctgag
gctcgatcagtggagaggtacagggagctcaacaagggcatggaggtgaaactgatgcag
ctgcagctcagagtggaccaggaggtaaggcagagtgctgctctgaatgagaccctcagt
gcagaacgagaggctgcaagcgttgagctggaggctctgaggtcgatcatacagaaactg
gagaaccagaaacaggagaagcttcctactggtccagttgtcagtgagaaggaggtggag
gaaagaaggagagccgaggagaaagctgcccagaagatccttcgacttacagaggagcta
caaacgctgcaaaaagaaaaggacgatgtttacatcgagaaaatggatgtctctgctcgt
ttgctcgagcaagagaaaacccaacaggagtgtgtgcgtcaggctgtgttgcaggccagt
gcagctcttcgctcagagctggatgaggaaaagatgaagtatcagggtctcctgaaggac
ttcacccgactggagcagagatacgacaacctcagggagatgagtctgctctcagagcgt
ggcaaaggccaccggaggaccgactcctcccagagtttgatcttcgagcctctttctcct
tcttcgactccactgtcaccccagtctctcaccccgctctcgctgtcacccttcccctct
gcgtttccttccccggaggcggtacggaggatcagcgtgacgtctcccactgaggagagg
agacactcggtgtggagctcagacacacagatggagcagctcatggagaagatggatgtt
cctaaggacccggcggtgaagatgaaaagagaagacttggaactagcttacgatgctgtt
cgggtagcaaacaagtttctggagcgtcagctccgtcagcagcaccatggctgggaggaa
gaactcaacgctctgaggtcccagctcagtcaggccgccatgtgttcctcctctgctgca
caggcacaggatctctgggagctgctggaagccagagagcaggagtgtgtgaggctgagg
agggagctgaaggagttaaaaacaacagtgtcgctcagacgcctcctctcacatgttttt
ccatcagctttgaccacagaagtgtgctgcccacctcagctgaaacctgcagcagtcagc
agctcgttggagtgtaggaaaagagatgaaaccaaactcatcaaaaacctcatcacagac
atccgagctgatgtcgctctgtctctgcctcctggtctgcctgccagaatcctctttctg
tgtgtccgtcaggccgactgcagcggcgaccaaggccgagctcgctcgctctgcagcgct
gccgtcaccgccatgaaggccgttaccaagaaacatattaatgacttacacatgacggca
ctgtggcttgaaaatgtctgtctgttgcacgacctgctggtccaacattccccaaaacag
agccttgacccagatgagttggttcctttgacctttgacctgagcgacttgatccgctcc
ctgagcgacctgtgtatccagtcctatcagcagctgctctgcatcacagagacacaccta
caaaaactcatagtcccagccttgctggagagcgagaccatcgcaggcctgtccagctca
gctgtgaaaatgggagtatccaggaagcgagcaggttcagatcccaagccggtgggagca
gaagcccccaccatggctcctgtgttgagggagcttggagcccttcacactgccctgctc
catcaggctctgccccagagcctgatggagcaggccttcaggcagctcacccacttcatc
tgcgcctgcactctcaacaacctgctgctgaggaaggacatgtgctgctggagccgtggc
ttgcaaatacgctacaatgtgagcctgctggaggaatggctgcggagccgaggtctgcag
gcagggggcatcatgaccacactggagcccctcatccaagcagctcagctgctgcaggtg
gggaaaaagactgacgcagacgctcaggccatagttcacacctgcactgccctctccagc
aaacagattgtgaaaattctgactctctacacgccacatagtggtcttgatgaaaaagta
tctttgaatttcatccgcacggtccaggaacttttgagaggctgctctgacagtcagcct
ccgcagctcctcgtggatgtgaggagagcgtttcctgtcacattcccctactcgcctccg
cccgtcgtcagcgctgaaggattagtcatcccagattccctgaagatctcttttctacac
agagcctga
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