Nematolebias whitei (Rio pearlfish): 119408088
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Entry
119408088 CDS
T08042
Symbol
cnga1a
Name
(RefSeq) cyclic nucleotide gated channel subunit alpha 1a
KO
K04948
cyclic nucleotide gated channel alpha 1
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
119408088 (cnga1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nwh04040
]
119408088 (cnga1a)
Ion channels [BR:
nwh04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
119408088 (cnga1a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
FancD2
Connexin
Piezo_TM1-24
Tim54
Sec62
MRP-S26
SLC52_ribofla_tr
PFF1_TM
NPR3
CLN3
GmrSD_N
Serinc
Motif
Other DBs
NCBI-GeneID:
119408088
NCBI-ProteinID:
XP_037530854
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Position
3:35933634..35942001
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AA seq
631 aa
AA seq
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MIMSTSRPSLAMAAPSAAEHSGEESEDDLAPQSNLLANMNNSNNNEKEKKSKKKKEKKEK
KEKKEKEEEKEKEKEKEKEKEKEKEKEKEKEKPKEIFVINPAGNLYYNWLFIITLPVMYN
WTMIIARACFEELQHDYIIYWIILDYSSDLFYLADMFFRTRTGYLEQGLLVKDEKLLQDN
YVNSRQFRLDILSMLPTDIFYFILGLDYPEIRINKLLRIGRMMEFFTRTETKTNYPNIFR
IANLIMYILIIIHWNACLYFSFSKSIGFGADEWVYPALDNPEEPEFGKPMRKYAFSLYWS
TLTLTTIGETPPPALDSEFLFHVVDFLVGVLIFATIVGNIATMISNMNAAQAQFQARIDN
IKQYMQVRKVSKELELRVIKWFDYLWNNGKAQDEREVLRYLPDKLKAEIAIQVHMDTLKK
VRIFADCEAGLLIQLVLKLRPQVFSPGDYICKKGDIGREMYIIKDGKLAVVADDGVTQFV
VLGSGSYFGEISILNIKGSKSGNRRTANIRSIGYSDLFCLSKDDLMESLTEYPDAKAMLE
EKGRQILMKDGLIDLDPAHIKPEAKELEEKVSKLYSTMELMQIKLKKVLGNYKSSGTALK
QRITELERMSGEEVEDEDEEVEKEVKTTSKS
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgatcatgtccaccagccgccccagtctcgctatggcagctccctcagcagctgaacac
agcggagaggaaagtgaggatgatctggcacctcaatcaaaccttctggccaacatgaat
aacagcaacaacaatgaaaaggaaaaaaagagcaaaaagaaaaaagaaaagaaagagaag
aaggagaaaaaagagaaagaagaggagaaagaaaaagagaaagaaaaggagaaagaaaaa
gagaaagaaaaggagaaagagaaagagaaagaaaagcctaaagaaatatttgttattaat
cctgctgggaatttgtactacaactggcttttcatcatcactttacctgtcatgtataac
tggactatgatcatagccagggcatgctttgaggagctgcagcatgactacataatctac
tggattattttagactacagctccgatctcttctacctggctgatatgttcttcaggacc
agaacaggctatctggaacaagggctgttggtgaaagatgagaagttgctgcaggataac
tacgtcaacagccgtcagtttcgcctggacattctttccatgctgccaacagatatcttt
tatttcatccttggcctcgactacccagaaattcgcatcaataagctgttaaggattggc
cgaatgatggagttcttcacaaggacagagacaaaaactaactacccaaacatcttccgc
atcgcaaacctaatcatgtacatcctcatcatcatccactggaatgcctgcctgtacttc
tcgttctccaaatctattggtttcggtgcagatgaatgggtctacccagctctggacaat
cctgaggagcctgaatttgggaaacccatgaggaagtacgctttcagtctttactggtcc
acactgacactgaccaccattggagaaaccccaccaccagctctagactcagaatttctc
ttccatgtagtggacttcttagttggagtcctgatcttcgcaaccattgtgggaaacatt
gccaccatgatatccaatatgaatgctgcccaagcccagttccaggcccgcattgacaac
atcaagcagtacatgcaggttcgaaaagtcagcaaggaacttgagttgcgagtcatcaag
tggtttgactatctgtggaataacggtaaagctcaggatgagagagaggtactgaggtat
ctcccagacaagctgaaagcagaaatagccatccaggtccacatggacaccctgaagaaa
gtccgtatctttgcagactgtgaggcaggccttttgatccagctcgtgctcaaactccgg
ccacaggtgttcagccccggagattacatctgcaagaagggcgacatcggccgggagatg
tacattataaaagatggcaaacttgctgttgttgctgatgatggtgtcacacagtttgtt
gtgttgggaagtgggagctactttggtgaaatcagcatccttaatattaaaggcagcaaa
tcgggcaacaggcggacagcaaacattcgcagcattggatattctgacctcttctgtctg
tcaaaagatgacttaatggaatcgttgactgagtatccagatgccaaagccatgctggag
gagaaggggcgtcaaatcctcatgaaggatggtttaatagatttggatcctgcccacatc
aagcctgaagctaaagagctggaggagaaggtcagtaaattatacagcacaatggagctg
atgcagattaaacttaagaaggttttgggaaattacaagagctctggcacagctctgaaa
cagcgaatcactgaattggagcgcatgagtggagaggaggtagaagatgaagatgaagag
gtggaaaaggaagtaaaaacaacaagcaaaagctga
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