Nematolebias whitei (Rio pearlfish): 119408417
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Entry
119408417 CDS
T08042
Symbol
sorcs2
Name
(RefSeq) VPS10 domain-containing receptor SorCS2
KO
K27082
VPS10 domain-containing receptor SorCS2
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nwh04131
]
119408417 (sorcs2)
Membrane trafficking [BR:
nwh04131
]
Protein recycling
Others
Others
119408417 (sorcs2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
SorCS_stalk
PKD
PKD_4
BNR_6
InlK_D3
DUF6786
DUF2769
Motif
Other DBs
NCBI-GeneID:
119408417
NCBI-ProteinID:
XP_037531168
LinkDB
All DBs
Position
1:14129340..14820045
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AA seq
1136 aa
AA seq
DB search
MAACAHLYLLLLAATPARIPAGPARCDSRALSRRGGQDGSFDTDGGGQGRGSLPPGSHAD
DDGSVGPGRPPRFRRATSWDKQMSLLSSSFVLKGDATHNQAMVHWTGENSSVILILTKYY
HADSTKVLESSLWRSTDYGTTYTKINLVPGTTIVVTSFFICPTNKKKVVMMGSSIDEQDQ
MLFISTDEGSSFQRQSIYFTPETLIFHPKEEDKLLAYCKDGRLYASADLGHKWTLLQERV
TKDRVFWSVSGVDVDPDLVHMEMQDTSGGYLYVTCLIQNCSNKMVTAQFLGKIDHNFLVV
QDDYIFVKVTTGNRTKHYVSYRRNEFVLMRFPKYALPKDVQIVSTDGKQVFLALQEWYQS
DTYNLYQSDLQGVYYSMILENVRSTKQPEANVLIDILEVRGVKGVFLANQKIDGKVTTLI
TYNKGRDWEPLTPPATDMNGKPVSCKVPDCHLHLHLRWADNPYVSGTVHTKESAPGLIMG
AGNLGSKLVEYKEEMYITSDCGKTWRQVFEEEHHILYLDHGGVIVAIKDTSIPLKILKFS
TDEGHTWNVHNFTSTSVFVDGLLSEPGDETLVMTVFGHISYRSDWELVKVDFRQSFPRQC
TESDYESWQLVDLKGEKCIMGQERTFRKRKETSFCIKGKSYTSALTSKPCQCSERDFNCD
YGFERSYTVGDRCFPDFWFDPDSPPDDCHLGQNYKSSTGYRKVISDICEGGVNKQQSAKQ
HSCPLLAPKGLQVGIKGQMLAVAPGDDITFIVHQEQGDTSSTKYQVDLGDGVRAIYQNLT
VTDEPIQHRYEHTGVYKVTVKAENVAGHDETTMYIQVTAPLQAVYLEAVPIAKKNDEVNL
TAVVLPAEANLTVFYWWIGGNLQPMLTLQNSILTRFSQTGEILVTIQVSNGRSMVQDSKI
VQVYDNFQILPLGFSRTLDNYNPNVTEWRNDVGQVVTKILAKVTGVPQESIVTVVKPGLP
TTADLYVLPLDNKPSKRSKFVDKRIPTIVQAFNDNNVSFMVRGGQQILVMLADPNAGYHG
AVGGPGIWALAVIFLIGVITTGSLILYKFKSPWLRTEDAYPPLFFRKLPGNRNIYAQMHN
EKEQEMTSPVNHSEDTQHIIQGEEFIDDDLDSQILGNHSGVVLSITSRELHSYLTS
NT seq
3411 nt
NT seq
+upstream
nt +downstream
nt
atggctgcctgtgctcacctctacctcctcctgttagccgccaccccggcccggatcccc
gcgggacccgcgcgctgtgacagccgggctttgagccggcgcggcggccaggacggctcg
tttgacacggacggcggtggacagggaagaggctccctcccgccgggctcgcacgcggat
gatgatggatctgtcggtccgggtagacccccccgcttcaggagagccacgtcctgggat
aaacagatgtccctgctcagcagctcgttcgtgctcaaaggggatgcgacccacaaccag
gcgatggtgcactggacaggagaaaacagcagcgtcatcctgatcttgaccaagtactac
cacgctgactccaccaaggtgttggagagctccctgtggaggtccactgactacggtaca
acatacaccaagatcaacttggtaccaggaacaaccattgtggtgacaagtttcttcatc
tgtccaaccaacaagaaaaaggtggttatgatgggttcatccatagacgaacaagatcag
atgttgtttatcagcacagatgagggatcctccttccagcggcagtctatttacttcact
ccagagacgctcatcttccacccaaaggaagaagacaagctgctggcctactgcaaggat
ggaaggctttatgcttcagcagatctgggccacaagtggactttacttcaagagagggtg
accaaggacagagtcttctggtctgtatctggtgtggatgtggaccctgatctggtgcac
atggaaatgcaagatacaagtggaggttacctgtatgttacctgtctcatccagaactgc
tcgaataaaatggtgactgctcagtttcttgggaaaattgatcacaactttctggtggtc
caagatgactacatatttgtgaaggtcaccacaggaaatcgcacaaaacattatgtgtcc
tatcggcgcaatgagtttgtcctgatgaggtttcccaagtatgccttgcccaaggatgtt
cagatagtgagtacagatgggaaacaagttttcctcgccctccaagagtggtaccagtcc
gacacgtataatctgtaccaatcagaccttcaaggtgtttactactccatgatcctggaa
aatgtgcgcagcaccaagcagccagaggcgaatgtcctcattgacatcctggaggtacgt
ggagtcaaaggagttttcttggccaaccagaagatcgatggtaaagtgacaactcttatc
acttataacaaagggcgtgactgggaacctttgactcctcctgccactgacatgaatggt
aaaccagtcagctgtaaagtgccggattgccacctccaccttcatctgcgctgggcagat
aacccctatgtatctggtactgtccacactaaagaatcagctccaggtctcatcatgggt
gctggtaacctgggctccaagctggtggagtataaagaagaaatgtacatcacttcagac
tgtgggaagacatggagacaggtttttgaagaggagcatcatattctgtatctagaccat
ggtggagtcattgttgccatcaaggacacatctattcccctcaagatactgaagtttagt
actgatgaaggacatacttggaatgttcacaacttcaccagcacctctgtgtttgttgat
ggactcctgagcgaaccaggagacgagaccctagttatgacagtatttggccacatcagc
tacagatcagactgggagctggtcaaggtggacttcaggcagtctttccctcgtcagtgc
acggagtctgattacgagtcatggcagcttgtagatctgaagggagaaaagtgcattatg
ggccaggagcgcactttcaggaagagaaaggagacttcgttttgcattaaagggaaaagc
tacacgtcagctctcaccagcaagccctgccagtgctcagaaagagactttaactgtgac
tatggctttgaacggtcttacacagtaggcgatcgctgtttccctgacttttggtttgat
ccagattcaccaccagacgactgccatcttggacaaaactataagtccagcactggctat
aggaaggtgatttctgatatatgtgaaggaggagttaacaagcagcaaagtgccaaacag
cacagctgccccctgttggctcctaaaggtctacaagttggcatcaaaggacagatgctg
gctgtggctcctggtgatgacatcacattcattgttcatcaggagcagggagacacaagc
agcacaaagtaccaggtggacctgggtgatggcgtccgagccatttatcagaacttgacg
gtgacggatgagcccattcagcaccgctatgaacacacgggcgtttacaaggttacagtg
aaggctgaaaacgtagcaggccacgatgagaccaccatgtacatccaagtcacagcccct
ttacaggccgtgtacctggaagcagttcccatcgcaaagaaaaatgatgaagtcaatttg
acggctgtagttctccccgctgaggccaacctgaccgtcttttattggtggataggagga
aatcttcagcccatgctgaccctgcagaatagcattttgactcgtttctcccagactgga
gaaatcttggtcaccatccaggtttccaacggtcgatcgatggttcaggactcaaagatt
gtccaagtctacgataattttcagatccttcctctgggcttcagtagaaccttggacaac
tataacccaaacgtcacagagtggagaaatgacgttggccaggtggttaccaaaattctg
gcaaaggtcacaggagttcctcaggagtccatagtgactgtggttaaaccaggtctcccc
acgaccgccgacctgtacgttctaccactggacaacaaaccaagcaagagaagtaaattt
gtagataagcgtattccaaccatcgtgcaggcgtttaatgacaacaacgtcagcttcatg
gtccgaggaggtcaacaaatacttgtgatgttagccgatcccaatgcaggctaccatgga
gcagttggaggtccaggtatttgggctctagctgtaattttcctaatcggcgtcatcacc
actggctcattaatcctatacaagtttaaaagtccttggcttaggactgaggatgcctat
cccccattgtttttcaggaagcttccaggaaaccgcaacatctatgcccagatgcacaac
gagaaggagcaggagatgaccagccctgtcaatcacagcgaggacacgcagcacatcatc
caaggagaggagtttatcgacgatgacttggactcacagattctaggcaaccattcaggt
gtggttttgagcatcacctccagagaattacacagttacctaaccagctga
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