Nematolebias whitei (Rio pearlfish): 119408470
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Entry
119408470 CDS
T08042
Symbol
arhgef11
Name
(RefSeq) rho guanine nucleotide exchange factor 11
KO
K12331
Rho guanine nucleotide exchange factor 11
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
119408470 (arhgef11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nwh04131
]
119408470 (arhgef11)
Membrane trafficking [BR:
nwh04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
119408470 (arhgef11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGS-like
RhoGEF
PH_16
PDZ
PDZ_6
PDZ_2
RGS
Pept_S41_N_bact
Motif
Other DBs
NCBI-GeneID:
119408470
NCBI-ProteinID:
XP_037531227
LinkDB
All DBs
Position
1:complement(14886249..14934893)
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AA seq
1434 aa
AA seq
DB search
MSLRQPTSTLDSPFAAWLSSLTTGDSDRRSSSSQQREPTADVSAESTSAGLVHRCVVVQK
DQLGFGFTVCGERVKLVQNVRPGGAAVKAGVQEGDRIIKVNGQLVSSMSHQEVVKLIKSG
TYVALTLQGPPPSVLLEPLPSDLTSNQRTNMSGEPLPPPPPPLPSGPSGTPSQRITGPKP
LQDPVVQKHASQILRKMLEQEEAELQDLLDQQLRNPSPSLEERIESAKRRAHQVRVKIQQ
DVDGTRSESVASYVLAGGHLSMDSSEGDIEAFESPHSSPSLPFRTPHHRLQSSDTHALPD
MSGKAQIISPEDEDEDEDGYALNEMDGPFQDIELLKSRPAHMMVFMRYIFTQLLDPNPLL
FYLSVEAYLGSTPKDARGLAPQICSHFLDPDAPLKIKVREEYLTDIESRLHAQEDIRGPL
SELQQQVLPDIQELIQDYRNKQMMGLGSLFGEGDLHLLDGDPLKEKQVVDRQVTALWEIL
SNHEEDRSSPLASAVLLYLRHSGIKLRDSKVFPSLSVEKEKWLAFLKSKKLTSTKDKKDG
EDKKRNPILKYIGKPRNMSQSTFHVPLSPSEVRPGSVKNIIQQFENHSDTPGEEGGDAAD
PQRLSSSSLGEEGKDGMDSPMVSVRLARSESLKAHGEGRRRGTGSGGDSVPRSRSDVDME
DCGEEQDQQGLRPLQHSASSSASSSSARSLENPTPPYTPRSRRRSVDSPLALLPDAAALE
DDVCDGQHWQETVPPHLLAALSPKEVDRQAVIYELFTTEVSHLRTLRVLDKVFFQKLRLV
LNSEELACIFPNLPQVYELHASLCEDMKKRRETPVVQDIGDVMVARFEGVAGNEFQEQSS
LLCCQQSQALELIKNKKRKDPRFTQIIQECETSPQCRRLQLKDLLVSEMQRLTKYPLLLD
QIIKHTEAESSDLPSLQHAQACCRAILQAVNEDVRRTEHRQRLVQYQRRLDAAPQFKSLD
LTTKRMIHEGPLMWKISKDKQIEIQALLVSDYLVLFQKSPDDRLQLRYPSRWLGGGGGVG
GGDSKTSFSPLVKLNSLLVRPVATDNKALYIISTTESQIYELVAGSSSEKNTWKDLLEKA
ISAAGGSSHINHRSFHLPSSSLCSPVPNSSDATEVNSMVEPSDSMETQSSIDDNTPADLS
VATNSHEAEEGSVAQAALQDIETLRQLILQDLDEDGWSHNSDNTPTNEMTNRRSLVMESQ
QPECLETVLNFSTEEAEPKEAPPTDTRQPSFQVVRKAVVAGPSASVPDGITDDVSLLSNH
SSESRGVAKVQGNTFYLVMPSEQGESITDDFDDPPTPTASHFPQPEEEVMSQQTQPEEEV
PAGCPEFRQSETMQLEEGKETSLSQAGTQRHIIKNADEIFITIEALMNKLHKLKEIEMAH
HKLLESLRDPSFSLKSEDRQCRSATVSRTPSMDGSSGEGKEGIPAETKILSTGF
NT seq
4305 nt
NT seq
+upstream
nt +downstream
nt
atgagcctccgccagcccacatccaccctggacagcccttttgctgcttggctcagcagt
ctgacgactggagactccgatcgcagatcctcttccagccagcaaagagaaccgacagca
gatgtctcagctgagagcacaagtgctggtcttgtccatcggtgtgtggtcgtgcaaaaa
gaccagcttggatttggcttcactgtgtgtggagagagagtcaagcttgtgcagaatgtt
agaccaggtggagcagcggtcaaggctggggttcaagaaggggatcgaatcatcaaggtg
aatggccagctggtgtcctccatgtcacatcaggaggtggtaaaactcatcaaatctgga
acgtacgtcgcactgacgctacaaggaccaccaccctccgtcctcttggagcccctcccc
tctgacctcacatccaatcagagaaccaacatgagtggggaaccgttaccccctccccct
ccacccttaccatctggaccgagcggcaccccatcccaaagaatcactggacctaaaccg
ctacaggacccagtagtgcaaaaacatgctagtcagatactcaggaagatgctggagcag
gaagaggctgaactgcaggacctcctggaccaacagttgagaaacccatcaccatcgctg
gaggaacggattgaaagcgcaaagaggagagctcatcaagttagagtcaagattcagcag
gatgtggatggaacacgatcagaatctgtggcaagctacgtcctcgcaggaggacatctt
tccatggactcaagtgaaggagacatagaggcctttgagagtccccactcctccccctca
ttacccttcaggacccctcatcacagactccagagctcggacacacacgcccttcctgac
atgagtggaaaggcccaaatcatcagtcctgaggatgaagatgaagacgaagatggttat
gccttaaatgagatggatggtccattccaggatattgagttgttaaagtcacgaccggca
cacatgatggttttcatgagatacatcttcacccaactgttggaccccaaccctttgctc
ttctatctgtctgtagaagcgtatttaggttccactcctaaagacgctcgtggcctcgca
cctcagatctgctcccacttcctggatccagatgcccctttgaaaatcaaagtccgagag
gagtatctcacagacattgaaagtcgtcttcatgcgcaggaggacatcagaggacctctg
tctgagctgcagcagcaggtgctgccggacatccaggagcttattcaggactacaggaac
aaacagatgatgggcctgggctctctgttcggggaaggcgacctgcatctcctggatgga
gacccgctgaaggagaaacaagtcgtggacagacaggtcactgcactctgggagatccta
tcaaaccatgaagaggaccgaagttctcctctggcgtcagcagtgttgctgtacctgcgt
cactcgggcatcaagctgagagattccaaggtgtttcctagtctcagcgtagagaaggag
aagtggctcgctttcctaaaatcaaaaaagctgaccagcacgaaggacaaaaaagatgga
gaggataaaaaaaggaaccccatcctgaagtacatcggaaaaccccggaacatgtctcag
tccacattccacgtcccattgtctccctcagaagtgcgtccgggcagtgtgaagaacatc
attcagcagtttgagaatcactcagacactccaggagaggaggggggggatgctgcggac
ccccagaggctgtcgtccagcagcctgggagaagaaggcaaagacggcatggacagtccg
atggtctctgtgcgtctggcacgcagcgagtctctgaaggctcatggggagggccggcgg
cggggcactggctcaggaggagactccgtgccccgttctcgaagcgacgtggacatggag
gactgtggagaagagcaggaccaacagggccttcgacctctgcagcacagcgcctcgtcg
tctgcgtccagcagctccgctcggtctcttgagaaccctacacccccatacacccctcgg
tctagacgcaggagtgtagactcgcctctggccctgctgcctgatgcagcagctctggag
gacgatgtgtgtgatggtcagcactggcaggaaacggttcctcctcatctgctcgcagcg
ctcagcccgaaggaggtggaccggcaggctgtcatatacgagctcttcaccacagaggtg
tcccacctgcgaaccctgagggtcctggacaaagttttcttccagaagttgaggttggtg
ctgaactctgaggagctggcctgcatcttccccaacctgccccaggtctacgaactccac
gcgagtctgtgtgaggacatgaagaagcgcagagagactcctgtcgtccaagacatcggc
gatgtcatggtggccaggttcgaaggtgtggcgggaaacgagtttcaggaacagtcgtcg
ctgctgtgctgccagcagtctcaggcgctggagctcatcaagaacaaaaaacggaaagac
ccccgcttcacccaaattatccaggagtgtgagacaagtcctcagtgtcggcggctgcag
ctcaaagacttgctggtgtcggagatgcagaggctcaccaagtaccctctgctgctggac
caaatcatcaaacacaccgaggctgagtcatcggacctcccctcacttcagcacgcgcag
gcttgttgccgggcgatactgcaggctgtgaacgaggacgttaggagaacagaacaccgt
cagcgcctcgttcagtaccagcgcaggctggatgctgctcctcagttcaagagtctggac
ctcaccactaagaggatgatccatgaaggtcctctcatgtggaagatcagcaaagataag
cagatagagattcaagccctgctggtgtcagattacctagtccttttccagaaaagcccc
gacgatcgactgcagctgcgatatccatcccgctggttgggaggagggggaggagtgggt
ggcggggacagcaagacctccttcagccctctggtcaagctgaactctctgctcgtccga
cctgtagctacagataacaaagctctgtacattatcagcaccacagagagtcagatctat
gagctggtggcagggtcttcatcagagaaaaacacctggaaggatttacttgaaaaggcc
atctctgctgctggaggttcgtcacacatcaaccacaggtcgtttcatttaccttcttcc
agtctgtgcagtcctgttccaaacagcagtgatgccactgaagtcaactctatggtggag
ccgtcagattccatggagactcagtcctccatcgacgacaacacacccgcagacctgtcc
gtagccactaacagccatgaagcagaggagggcagcgtggcacaagctgcattgcaagac
atcgaaaccctgcggcagctcatattgcaagatctagacgaggacgggtggagccacaat
tcagacaacacgcccaccaatgagatgaccaacagaaggagtttggtgatggagagccag
caaccagagtgtttggagacggtcctcaacttcagcacagaagaggcggagccaaaagaa
gccccgcccacagacaccaggcagcccagttttcaggttgtgaggaaagctgtggttgcg
ggtccttctgcttctgtccctgatggcatcactgatgatgttagcctcctctccaatcat
tcctccgagtctagaggcgtggccaaagttcagggaaacactttctacctggtgatgccc
tcagagcagggcgagagcatcacagacgactttgacgaccctcccacacccaccgccagc
cacttccctcagcctgaggaggaagtgatgtcacagcagacacaaccagaggaggaagtg
cctgctggctgcccagagttcaggcagtcagagactatgcaattggaggaaggaaaagaa
acgagcctgtcgcaggcagggacacagaggcacattatcaaaaatgcggatgaaattttc
atcacaatcgaggcgctgatgaacaagttgcacaagctgaaggagattgaaatggcccac
cacaagcttttagagtctcttcgagatccgtcgttcagtctaaagtcagaggaccgacag
tgtcgctcagcaaccgtctccaggacgccctctatggatggcagttcaggagagggtaaa
gaaggaatcccagcagagactaaaattctgtcaactggattctga
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integrated database retrieval system
