Nematolebias whitei (Rio pearlfish): 119408474
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Entry
119408474 CDS
T08042
Symbol
frmpd1b
Name
(RefSeq) FERM and PDZ domain-containing protein 1
KO
K23954
FERM and PDZ domain-containing protein 1
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
nwh04990
]
119408474 (frmpd1b)
Domain-containing proteins not elsewhere classified [BR:
nwh04990
]
Other domain-containing proteins
FERM domain-containing proteins
119408474 (frmpd1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FERM_M
RA_2
PDZ
PDZ_6
FERM_C_FAK1
FERM_f0
DUF6288
PDZ_2
Motif
Other DBs
NCBI-GeneID:
119408474
NCBI-ProteinID:
XP_037531226
LinkDB
All DBs
Position
4:complement(21637679..21670892)
Genome browser
AA seq
1702 aa
AA seq
DB search
MEEKERSRSRSPARRGSRVQQVVGTIIRRTRESLSRERLLGDGRSQRSNSVNSQSFQAKL
TLQITRDPVLDRSTGHGFTLTADTALLVRDVSAGSPADGILYPGDQVLQINDKVMEDLSV
EQVENIMRDLEDCINVTILRHMTNPKSSIMSAEKRARLRSNPVKVRFAEEVVVNGHTQGN
SLLFLPNVLKVYLENGQTKAFKFDITTTVKDIVLTLKDKLSIRAIEYFALVLEQQYSITK
LLLLHEDELIQKVVQKKDSHDYRCLFRVCFVPKDPMDLLQDDPMTFEYLFLQSVGDVLQE
RFAVEMKCNTALRLAALHMHERLDSCGQTRTSIKSITKELGLDSFISPTLLSNMRERDLR
KAISYHLKKIQSLLEPRQKVISATQARLAYLTQLGELISFGGRSYTATMMLQDREMLVSL
LVGAKYGMSQVINHKLNMISTLVEFSNISRVELLSESDKVSLLRISLHDMKPFALLMDSQ
AAKDLGCLLGGYCKLLVDPSVNVFRLGRPKVRVHRIPAEEGVCGKFAVIEGVCYESLSSY
VSRCCSDSDDSTDEDDPMDSQSYKGSDPASQDWEERRREEEVKRKEEERREREEYKGKQE
VKIIVTTEGKENESEEDGGATGSGLRKFKVTDEEMNSWYHTDPRVTSSFSSLSSSSLSAA
LEDSSTSAKSPSRLDPLRGPRTGEDLSDSDSHHLYLLEPKRQGPMRPTNLNYRGNDNSCL
CFAELSKADFLSSPSGATSDDDDEEEEDSGVQTLRRISKIPSSRDLRMIDSTPFERLPIK
RKKKTPPKVPVRTSSIPGNKAGRAEHRLSKDEEGLFLTPSPNPKPALLVKDDVSDSEDEF
FDARERFTPPVPDLSDAELADRRNANRLSGTWNGQPIAGKEPSSSRANTTQSHKTTKESE
ILKDPENELINKQPSFSKKPEVKIKPPLAPKPHLPPKPQIVPPKSPQHGRAYAQCNGDAS
GHLSSELLEMEPDTMEFKSVTLGGLSPSSSLITAVRNSKQCPQATTLQPEEKAKRQENSP
KQNKNLVRENGSHVSKDKELIPNEKETSKVERKISGANILTRKAPNPPTVSRSNSGTKPA
VPPPVPPKPTSTINFHPLSLPASSPVSPTDPSKGIFKDAVCPPNGIHPWSSRNGSIQSGP
RRVSLSHENLSPKDTDTPLTITTSPSSANSKGVEDLESKEPGLSGSRSDLRTSSSSLGGR
LPATALRGKIQSLPWYMTRSQEILGTPDYPSTSSINGDTSGFGSGLSVASGLSDLNKTPV
KDKETVALKYVSKGNILDDGAEVVIAIIKEAQEVSSHMKKANGTNGSHPNLSFRGNSFHS
GGVSSEQPQSRPHSAVGLGGVTSMQIGGDSPTSSTADTTPPQQHREACGCRTVYANCFSG
DTEDGISFDEELTVYEFSRRIRPKPDQTATAPSPTTPPSKPNILSMLRDNPRPLSTFSTT
SSELSPLVSCPGSSTVSLGGPLRSLTNKNYGGLKGGFASLREDIDQLILVLERESRDQFK
QGSKLESTGVKIGPDLNHNATEDNTLSMGIQNCTGTSPATMTEPERRLLQAEARRLASGC
QRATRVGWAPDEALRSLSNSFSALVQLTAACLQTNPCPGCNVCQKARQVCRGDDDDGQQP
MEKLKEIVGLYREFVGAVETAGTGAAVGSKSGSGQGQGETDGVRLLAKRCTVLISSVFAL
TQLFRTPALEATDTPGHVPLNF
NT seq
5109 nt
NT seq
+upstream
nt +downstream
nt
atggaggagaaggaacgaagcaggagcaggtctccggctcggaggggcagtcgggtgcag
caggtggtgggaaccataatacggcgcactcgagagtccctgagcagagaacgattgcta
ggcgatgggaggtcgcagcgctccaacagtgtgaacagtcagagcttccaggccaaactc
acgctgcagatcaccagagatcccgtcctggaccgcagcaccggacatggtttcaccctc
accgcagacacggccctgctggtcagggacgtctccgcagggagccctgcagatgggatc
ttatacccaggagaccaggtgctgcagataaacgataaagtgatggaggatctgagtgtg
gagcaggtggagaacatcatgagagacttggaggactgtatcaatgtgactatcctgcgg
cacatgacaaatccaaagtcgtccatcatgtcggcagagaagagagctcgcctgaggagt
aatccagttaaagtgcgcttcgccgaggaggtggtggtcaatgggcacactcagggaaac
tctctcctcttcctccccaacgtcctaaaagtatatcttgagaatgggcagaccaaggcc
ttcaaattcgacattaccactactgtgaaggacattgttctgactctgaaggataaactg
tccatccgggcgattgagtactttgcccttgtcctagagcaacagtacagcatcaccaaa
ctcctgctgctgcatgaagatgagctcatacaaaaggtggtgcagaaaaaggactcgcat
gattacagatgtctgttcagggtttgttttgttccgaaggaccccatggatctgctgcag
gatgaccccatgacctttgagtacctctttttacagagtgtcggagacgtgctgcaggag
cgttttgctgtggagatgaagtgtaacactgcgctccgcctggctgccctgcatatgcat
gagagactagatagctgtggacagacccggacgtctatcaagagcataacgaaggagttg
ggcctggacagcttcatctctcctacgctgctgagcaacatgagggaaagggacttgagg
aaggcaatcagctaccacctcaaaaagatccagtctttgctagaaccacggcagaaggtt
atatcagccacgcaggcccgattggcctacctcactcagcttggagagctcatttctttt
ggaggacggtcttacacagctaccatgatgcttcaggacagggaaatgctggttagcctg
ctagttggagccaagtatgggatgagccaggtcatcaaccacaagctcaacatgatctct
acgctggttgagttcagcaacatcagccgagtggagctgctatcagaatccgacaaagtt
agcctactgcgcatttcactacatgacatgaagccatttgccttactgatggattctcag
gcagccaaagacttagggtgtctactgggaggttactgcaagctcctggtggatccaagt
gttaatgtcttccgtctggggcgcccaaaagtgagggtgcaccggattcctgctgaagaa
ggtgtgtgtgggaagttcgctgtaatagagggcgtgtgctatgaatccctatcaagttat
gtatctcgctgctgtagtgactcagatgactccacagatgaagatgacccaatggactct
caaagctacaaaggttcagacccagcaagtcaggactgggaggaaaggaggagagaggaa
gaagtgaagaggaaagaggaagagaggagagagagagaagagtacaaaggcaaacaggaa
gttaaaataattgtgacaacagagggcaaagaaaatgagagtgaagaggatggaggagca
acaggaagtggtttgcgtaaattcaaagtcacggatgaagaaatgaacagctggtaccac
actgacccacgggtcaccagcagtttctccagcttgtccagcagttctttgagtgctgcc
cttgaagacagcagcacttcagctaaatccccctctcgcttagatcctcttcgtggacca
cgcacaggcgaggatctttcagactcggacagtcaccacctttacctcctggagccaaaa
cgtcaagggcccatgcgacccaccaacttgaattaccgtggcaatgataactcatgtctc
tgctttgctgaactctccaaggctgatttcctgtctagcccttctggggctacaagtgat
gatgatgatgaggaggaggaagattcgggagtccagacactcagacgcatttctaaaata
cctagttcaagagatctgagaatgattgacagcacaccttttgaaagattgcccattaag
agaaagaagaagactcctcccaaagttccagtaagaacaagttcaattcctggaaataaa
gcaggacgagctgagcatcgcctttctaaggatgaagagggtctatttctcactccttca
cccaaccccaaaccagcacttttggtaaaggacgatgtctccgattcagaagatgagttc
tttgatgcacgggagagatttactccaccagttcctgacctgtcagatgctgaactagct
gatcggcgaaatgctaatcgtttgagtggaacctggaatggtcaaccaatagctgggaaa
gaaccatcatcttctcgtgccaatacaactcagtcccataaaactacaaaagaatcagag
atattaaaagacccagaaaatgaactcatcaacaaacaacctagcttttcaaaaaaacct
gaagttaagatcaaacccccactggcacctaagccccacctgcctcccaaacctcagata
gttccccccaagtcaccgcaacatggaagagcatatgcccaatgcaatggggatgcctct
ggacatctgtcttctgaactcttggaaatggaaccagacacaatggaatttaagtctgtc
acattgggtggattgtctccgtcatcatccttgatcactgcggtgaggaatagtaaacag
tgtccacaagccacaacattgcaaccagaggaaaaggcaaaacgacaagaaaacagccca
aaacaaaataaaaatcttgttcgtgaaaatggatcacatgtttccaaagataaagaactg
attcctaatgaaaaggaaacttcaaaagttgaaaggaaaatcagtggcgctaacatactg
acaagaaaagcaccaaacccgcctacggtctctcgctctaattcaggtacaaagccagct
gttcctcctccagtcccacccaaacccacttctaccatcaatttccacccattgtctctg
cctgctagctctcctgtttctccaactgacccaagcaaagggatctttaaagatgctgtc
tgtccaccaaatggaatccatccctggagcagccgcaatggcagcatccagtcaggacct
cggagggtttctttgagccatgagaacctatcaccaaaagatacggacacaccactcact
attaccacctcacctagctcagccaactctaaaggtgttgaggacctagaaagtaaagaa
cctggactatctggttcacggtctgacctgagaactagttcttccagtcttggaggcaga
ctaccagccactgctttgagagggaagatccaatccttgccttggtacatgacacgttcc
caggagatcctaggaacccctgactatccctccacaagctccattaatggggacacatct
ggctttgggtctggtttgtctgttgcaagtggtttatcagatttaaacaaaacccccgtc
aaggacaaagagacagttgccttaaaatatgttagtaaaggaaacattttagatgatgga
gctgaggttgtcatagcaattatcaaagaggctcaggaagtaagttcacatatgaaaaag
gccaatggaacgaacggctcacaccctaatctgagctttagaggaaacagtttccacagt
ggcggtgtttcatcagagcagccacagtcacgtccacattcagcagtggggttgggaggt
gttactagcatgcagattggaggtgactcaccaacctcctcaacagcagacactactccg
ccacagcaacatcgggaggcttgtggctgtcgcacagtttatgccaactgctttagtgga
gacactgaggatggcattagctttgatgaggagctcactgtctatgagttttcccgccgc
atacgccccaaacctgaccaaactgccaccgccccttctccaacaacacctccttcaaaa
cccaatatactgtctatgttgagggacaacccacgtccactgtccacgttctccaccaca
tcttctgaactgagtcctcttgtttcgtgtccaggctcatccacagtttcacttggtggt
cctcttcgttccctcaccaacaagaactatggagggttaaagggaggttttgcttctcta
cgtgaagatatagatcagcttattttagtgttagaaagggaatcccgtgatcagttcaaa
caaggttcaaaattagaaagcacaggtgtaaaaatagggcctgacctaaatcacaatgca
actgaagacaatactttgtcgatgggaattcaaaattgtactgggacaagtcctgccacc
atgacagagcctgagaggagacttctccaagcagaggctcgacgattggcatctgggtgt
caacgagctacacgtgtcggctgggctccggatgaagcactacgttctttatccaacagc
ttcagtgcgctggttcagctgacagcagcctgcctgcaaacaaatccctgtcctggttgt
aacgtctgccaaaaagcaaggcaggtctgcaggggtgatgatgatgatgggcagcagcct
atggaaaagctaaaagagatagtcggtctgtatcgagagtttgttggagctgttgaaaca
gctggaactggtgctgcagttgggagtaagtctgggtctggacagggtcaaggagagacg
gatggagtgaggctactagccaaacgctgcactgtgctcatctcatcagtatttgcgctc
acacaactcttccgaacacccgcactggaagccacagacacacctggacacgtacctctt
aatttttga
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integrated database retrieval system
