KEGG   Nematolebias whitei (Rio pearlfish): 119408497
Entry
119408497         CDS       T08042                                 
Symbol
kdm3b
Name
(RefSeq) lysine-specific demethylase 3B isoform X1
  KO
K15601  [histone H3]-dimethyl-L-lysine9 demethylase [EC:1.14.11.65]
Organism
nwh  Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:nwh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:nwh03036]
    119408497 (kdm3b)
Enzymes [BR:nwh01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.65  [histone H3]-dimethyl-L-lysine9 demethylase
     119408497 (kdm3b)
Chromosome and associated proteins [BR:nwh03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    119408497 (kdm3b)
SSDB
Motif
Pfam: PWWP_KDM3B Tudor_KDM3B JmjC Cupin_2
Other DBs
NCBI-GeneID: 119408497
NCBI-ProteinID: XP_037531251
LinkDB
Position
4:23447632..23491374
AA seq 1787 aa
MPKSKNKSQTTRAKESRLAMRLLRVKKRRALAEMDYKEECRVQDRKRKQIKRRKESLQAT
MRTNKRDAAYSGQVFVEFDKPSQRCSWVQVYDEGVKAVLVEDSIVWVSRSDGTRVTGVPA
SATAWPALVFRSLVDRVGLGSLFPVEYFGNKNFEFLPDNKCIQRFEIDKDMRHPLLLEQP
SLHAAISSWRTDFELQEIFRKGSYTVQGRRVRVYQPEFDESWASGMVSQHDPISHIMEIT
LDKGEENQMVDPRVIHVMLTEEELGKNGRRGKDSETMKGDGGRRRKTPSEDEEDLHLKRF
KGAADSADTETQNPGDSSKTVVEGMGIWTGDSGERIGSTTKNGSSTEGISPQVRVSPPAT
NSTPHMDLSNAPSRYPAQIKENGRLISNQGAADPTSIITHTPNPPPLKPAPSLLSAASFP
SVGQMPILVPGAPTPKSSTSPQPDREDTCQPAYSKTAALVSPGPVTISWSQDSSPSVALS
GSVGFNPKAPTWGSQTESSKTATSFHLPQAVPSPPVFGDAPPQTNGAPATTVASQSTPRP
FGFGFSGAKPQQDHNLFFQCMTQNSGTSSILTKGQTQSKDTNYFTAVSESLSKEPPGLFK
PASSTEGLKKPEQPKVPEVPSAGNGVFNKSSAFQVGAAGGRSPTLTAGGLSVVPGAQSAI
KKNSNGENSAGGLGLQSGFNSTDIHQNLFLQASKESANPFLAYGDTIAHTSFVGLTGNES
QTLGVALDSKPNLFTMAEPPKGILSSTFPSISAAGSVSSSSTSTHPQSEVSVTKKEQEVG
EMPTSTLGCPILGSNGPDEVPGSFDQSQSQKFILEERGLSSKRDSDFSSNSDLSDLSENE
DGLDKGQLLGERFYPSKDGVILQKTKIQGPPKGRPRNKPFKVGQSILKDQSKVRRLKQSG
ESFLQDGSCISVAPHLHKCRECRLERYRKYRNTEDDSDEDDDPNVACRFFHFRRLAFTRK
GILRVEGFLSPQQSDAMAMGLWLPAPAIQEGLDLDTSKYILANVGDQFCQLVMSEKEAMM
MVEPHQKVAWKRAVRGVREMCDVCETTLFNIHWVCRKCGFGVCLDCYRLRRNRQREDTDE
MPEDEVFSWLKCAKGQPHEPQNLMPTQIIPGTALYNIGDMVHAARGKWGIKANCPCASRH
TKSLVRPTAPNGISQQSATSSAGGLAAAASGTSTAPKPEGETPVIKTEPTQTATPSDTGG
GESVGSTSNSISSTSSPCNVTQSPTKDSRPSGEGNSSALHWLADLATQKAKDDTKESGSL
RSMMSRESRPPFGLDSLSVLSKPSASSPKLFNSLLLGPSMTQSKPEGSSLRDLLNSGPGK
LPQGPGESGVPFPSVFTSASSDKMKSSLPNFLDHIIASVVETKKAEGRRSGSSEGSELSV
LGTRKDGVMGLSVLEPHTSHTWLCDGRLLCLQDPSNTNNWKIFRECWKQGQPVLVSGIHK
RLKSELWRPEAFSEEFGDQDVDLVNCRNCAIISDVKVRDFWDGFQTISKRLQDSDGKPMV
LKLKDWPPGEDFRDMMPTRFNDLMDNLPLPEYTKRDGRLNLAARLPNFFVRPDLGPKMYN
AYGLTSADDRKVGTTNLHLDVSDAVNVMVYVGIPHKENNNEEEAVISGYKEVMITIEEGD
VDEMSKRRANEGKEKPGALWHIYAAKDAEKIRELLRKVGEEQGQENPPDHDPIHDQSWYL
DQGLRRRLYEEYGVQGWAIVQFLGDAVFIPAGAPHQVHNLYSCIKAAEDFVSPEHVRHCF
RLTQEFRHLSTTHTNHEDKLQVKNIIYHAVKDAVGTLKAHEPKLARP
NT seq 5364 nt   +upstreamnt  +downstreamnt
atgccgaagtccaagaacaagagccaaacgacccgggcgaaagagtcgcggctggctatg
cggctactgagagtgaagaagagaagagccctagcagagatggactacaaggaggaatgc
cgagttcaagaccggaaacgaaaacaaataaaaagacggaaagaatcgctacaggctaca
atgaggacgaacaaaagagatgcggcgtatagtggacaggtgtttgtggagtttgacaaa
ccatcgcagcgatgttcatgggtgcaggtgtatgacgagggggtgaaggccgtgttggtt
gaagactctatagtttgggtcagccgcagtgatggtaccagggtaactggagtcccagct
tcagccactgcctggcctgctctggttttccgctcgctggtggacagagtgggtttagga
tcactttttcctgtggagtattttggaaacaagaactttgagtttttgcctgataacaaa
tgtatccagaggtttgagattgataaagacatgagacaccccctgctgttggagcagccc
tcacttcatgccgccatctccagctggcgcactgactttgaacttcaggagatcttcagg
aagggttcatatactgttcaaggacgcagagttcgtgtgtaccagccagagtttgacgag
agctgggcctctggaatggtctcacagcatgaccccatctcacacattatggagattact
ttggataagggagaagaaaatcagatggtagatcctcgtgtaatacacgtcatgctaacg
gaggaggagctgggtaagaatggacgacgagggaaagacagtgaaacaatgaagggagat
ggaggacgcagacgcaaaactccctcggaggacgaggaggacttgcacttgaaacgtttt
aaaggagctgctgattctgctgacacagaaacacaaaaccctggtgactcaagtaaaact
gtggtggaagggatggggatctggacaggagactctggagaaaggatcggcagcacaacc
aaaaatgggagctccactgagggaatctctccccaggtgagagtgtctcctccagccacc
aattccacaccccacatggacctgtcaaatgctccttctcgttatcctgcccaaataaaa
gaaaatggtcgcttgatttctaaccaaggagcagcagaccccaccagcattattactcac
acccccaatcctcctccacttaaaccagcgccctccctcctctctgcagcatcttttcct
tcagtagggcagatgccaattctggtccctggagctccaactccaaagtcctccacatcc
ccccaaccagatagagaggatacctgccagccagcttactctaaaacagctgctcttgtg
tccccgggacctgtcactatttcctggtcacaggacagcagtcccagtgtggctctgtca
gggtctgtgggtttcaaccctaaagctcctacctggggaagccagactgagagctccaaa
acagcgacaagttttcatttgccccaagctgtgcccagtcctcctgtatttggagatgct
cccccacagaccaatggtgctcctgccaccactgtagcctcccagagtactccaagacct
tttggttttggctttagtggagccaagcctcagcaagaccataatctgttttttcaatgt
atgactcagaattctggtaccagctcaatccttacgaagggccagacccaatccaaggac
acaaattactttactgcagtgtctgagagtctgagtaaagagccaccaggcctttttaag
cctgcatcttccactgaaggtctaaaaaagcctgagcagcccaaagtgcctgaggtccct
tcagcaggaaatggtgtgttcaacaaatcctcagccttccaggttggtgctgcaggagga
cggagtcccactttaacggctggtggtctcagtgtggtccctggagcccaaagtgctatt
aagaaaaacagtaatggtgaaaattctgcaggggggttaggactgcagtctggttttaat
tccacagatatccaccagaacctttttctgcaggcctccaaagagtctgctaatccattt
ttggcatatggggatacgattgctcacacatcttttgttggcctcactgggaatgagtca
caaacgttgggtgttgccttggacagtaagcctaacctgttcaccatggcagagccacct
aaaggtattctgtcctccactttcccatcaatctcagcagctggttcagtcagctcttct
tcaacctccacacatcctcaaagtgaggtgtctgtaacaaagaaggagcaagaagttgga
gagatgcccacatccaccttgggctgccccatacttggaagtaacggtcctgatgaagtg
cctgggtcctttgaccagagccagtctcagaagttcatccttgaagaaagaggcctctca
tctaaacgtgactctgattttagcagcaacagtgacctgtcagaccttagtgagaatgag
gacggccttgataaaggccaactccttggagagcgtttttatccttccaaggatggagtc
attctacagaaaactaaaatccaaggtcctcctaaaggccgtccacgtaacaagcctttc
aaagttggccagtctatactcaaagatcaaagcaaggtacgccgtttgaagcagtctgga
gagtcctttctccaggatggctcctgcatcagtgtggctcctcatttgcataagtgccgt
gaatgtcgactggagcgttaccgtaaatatcgaaacacggaggacgacagcgacgaagac
gacgacccaaatgtagcttgtcgtttcttccacttcagaaggttggcttttacacgtaaa
ggcatattgcgtgtggaaggcttcctaagtcctcagcagagtgatgcaatggctatggga
ctctggttgcctgctccagctatacaagaaggccttgacctcgatacatccaagtacatc
ctggccaatgtgggagaccagttctgtcagctggtcatgtctgagaaggaggccatgatg
atggtggagcctcaccaaaaagtggcgtggaaacgggctgtgcgtggagtcagagaaatg
tgtgatgtatgcgagacaactttgtttaacatccactgggtctgtcgcaagtgcggcttt
ggagtgtgtctggactgctatcggctccgcaggaacaggcagagagaagatacggatgaa
atgccagaagatgaggttttctcttggttaaagtgtgccaaaggtcagcctcatgagcca
caaaatctcatgccaactcaaatcatacctggaacagctctttacaacataggtgacatg
gtgcatgctgcaagaggcaagtggggtataaaagccaactgtccctgcgccagtcggcac
acaaagtctttggtgcgccccactgcccccaatggcatttcacagcagtctgcgacaagc
agtgcaggtggactcgcagctgcagcctctggtactagcactgctccaaaaccagaggga
gaaacgccagtgatcaaaacagagccgacacaaacagctacgccctcagatactgggggt
ggggaaagtgtgggtagtaccagtaactccattagtagtacctcctctccctgtaatgtc
actcagtcccctaccaaggactcacgcccatcaggagagggcaacagttctgcgctgcat
tggttggcagacttggctacacagaaagctaaggatgacaccaaggaatccggttcactt
cgctccatgatgagccgagaaagtcggcctccctttggcctggactcactcagtgtcctt
tcaaagccgtctgcttccagcccgaagctgtttaatagtttgttactcggccccagcatg
acccagtccaaacctgaggggtcaagcctccgcgacttgctcaactccggtccgggcaag
ctgccgcaaggccctggagagagtggggtccccttcccctccgtttttacctcagcaagc
agtgacaaaatgaagagcagccttccaaacttcctggatcacatcatcgcctcagttgtg
gagaccaagaaggcagagggtcgtcgctccgggtcctctgagggcagcgaacttagcgtg
ttggggactcgtaaagatggcgttatgggtctaagtgttttggaaccacatacctcacac
acttggctttgcgacgggcgtctcctttgcctacaggatcccagcaacaccaacaactgg
aagatcttcagagagtgctggaaacaaggccaacctgtgttggtgtctgggattcataaa
cgcctaaagtctgaactgtggcggcctgaggccttcagtgaggagtttggagaccaggat
gttgacctagtcaattgtagaaactgtgctattatttctgatgtaaaggtccgagacttc
tgggatggttttcagacgatctcaaagcgattgcaggacagcgacggcaagcccatggtg
ttaaaattaaaggactggccaccaggtgaagacttcagggacatgatgcccacaaggttt
aacgacttgatggacaaccttcctttgcccgagtacacaaaaagagacggtcgtctaaac
ctcgctgcacgcttgcccaacttctttgtgcgtcctgacctcggaccaaagatgtacaac
gcctacggcttgacctcagctgatgacagaaaggtcggaaccactaaccttcatttggac
gtgtctgatgctgtcaacgtcatggtgtatgtcggcatccctcacaaagaaaataacaac
gaggaagaggcagtaatctctggatacaaagaggtcatgatcactatagaggagggagat
gtggacgagatgtcgaagaggagggcgaacgaggggaaggagaaacctggagctctgtgg
cacatctacgctgccaaggatgctgagaagattcgagagctgctccgcaaggtgggtgaa
gaacaaggtcaagagaaccctccagaccacgaccctattcacgaccagagctggtacctg
gaccaggggctccgccgccgcctttatgaggagtacggcgtccagggctgggctattgtt
cagttcttaggagacgctgtgtttatccctgctggagctccacaccaggtacacaatctg
tacagctgtatcaaggcggcggaggattttgtgtccccggagcacgtgaggcactgtttc
agactgacgcaggagttcagacacctttctacaactcacaccaaccacgaggacaagttg
caggtgaagaacatcatctatcacgctgtgaaggacgccgtcgggacgctgaaggcacat
gaacccaaactggcccgcccttag

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