Nematolebias whitei (Rio pearlfish): 119408519
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Entry
119408519 CDS
T08042
Symbol
rlim
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM isoform X1
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nwh04121
]
119408519 (rlim)
Enzymes [BR:
nwh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119408519 (rlim)
Ubiquitin system [BR:
nwh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119408519 (rlim)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
Prok-RING_4
zf-RING_16
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
119408519
NCBI-ProteinID:
XP_037531276
LinkDB
All DBs
Position
4:24781042..24790641
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AA seq
670 aa
AA seq
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MEGSDNVEQGGSDQPESQRRRQLDRLDREEAFYQFVNNLSDEDYRLMRDNNLLGNPGEVT
EDELFSRLQQIKDGPEQQNNNPSTESQEDQVEQPESSEDPPGGDSLLDWLNTVRRTGNTT
RTGHRGNQSWRAVSQTNPNSGDFRFSLEISVNRNLAEQQAAAEGEQEPAEQSPEVPPEVV
ANPEPPVPMETDVVEEQVVEELAVIVEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPELEE
AVLPEVEREPPSPAAAPPEQAPPCSSPRRGQRRARSRSPEPRRTRARLARSRSPLSLDQL
DGLPNPRHPYTSISPSSSTDAPSVPQVEGSSRTRQHILSRQNLVDGDFGPPPRAEAELVP
EGQPVGSQESESTGVEGGAAGRRPPTIMLDLQVRRVRPGEYRQRDSIASRTRSRSQNSNN
TFLYESERGGFRRTFSRSERAGVRTYVSTIRIPIRRISDAGLGEATSMALQSMIRQIMTG
FGELGYLMDSDSDSSDSTRGTSTPADLETLNNPEANNVDAPAADVDEQPVAAGVRGRTVE
TEADEGLATGPQGSGGRARPRPPINLEEPSSLPFLRLAHFFLLNDDDDDQPQGLTKEQID
NLSMRSFGESDALKTCSVCITEYAEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAV
LVSANRESVI
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggaagggtctgacaatgttgagcagggtggcagtgaccagccagagtcacagcgcaga
aggcagctggatcgcctggacagagaagaagccttctaccagtttgtcaacaatctcagt
gacgaggactatcgtctcatgagagataacaaccttttgggaaatccaggagaggtgacc
gaagatgaattgtttagtagactacaacaaatcaaagatggtccggagcaacagaataat
aacccaagcactgaaagtcaggaagatcaagttgaacaaccggagagctctgaagaccct
cctggcggtgatagcctcttggactggctaaacacagtgcgccgcaccggcaacacaacc
agaactggtcatcgtggaaaccagtcatggcgggctgtcagccagaccaacccaaacagt
ggtgattttcgcttcagtttggagataagcgtgaaccgcaatctggctgaacagcaagca
gctgctgaaggggagcaggagcccgctgagcagtcccctgaagttcctccagaagttgtt
gcaaatcctgaaccaccagtacctatggagacagacgtagtggaagaacaggttgtagaa
gaacttgctgtcattgtggagccagaacctgaacctgaacctgaaccagaacctgaacca
gaacctgaacctgaaccagaaccagaacctgaaccagaacctgaacctgagctagaagag
gctgttttgccagaggttgagagggaacctcccagcccagctgcagctccgccagaacaa
gctccaccttgttcttctccacgtagaggacaaagacgagcccgcagccgtagcccagaa
ccacgcaggactagggccaggttagccagaagtcgctctccactcagtttggatcagctt
gatggtctacctaatccacgacatccatacacctcgataagccccagttcttccacagat
gccccctctgttcctcaagtagagggcagttctcggactcgacaacatatactttcaagg
caaaatctggttgacggtgattttggtccgccacccagggctgaggccgaactggtacca
gagggccagcccgttggatctcaggaaagcgagtctactggggttgaaggaggtgcagca
ggacgacgtcccccaactataatgctcgatctccaggtgcgtcgcgtgcggccaggcgaa
tatcgacaaagggacagcatcgccagccggacccggtcgcgctcccagaactccaacaac
acatttctttacgagagtgagcgtggtgggtttcgcaggaccttctcgcgctctgagcgt
gctggtgtgaggacctacgtcagcactattcgaatccctattcgaagaatttcagacgca
ggtttgggagaagcaacctccatggctctgcagtctatgatcaggcaaatcatgacaggc
tttggtgaactaggctacctcatggattcagactcggattcttcagattcaacccgtgga
accagcacgcctgcagacttggaaaccctcaacaatccagaggcaaataacgtggacgcc
cctgctgctgatgtcgatgaacaaccggtggctgccggagtcagggggaggacagttgag
actgaagcggacgagggccttgccactgggcctcagggttctggtggcagggctcgaccc
agaccccccatcaacctagaggagcccagctcattgcccttccttcgactcgctcacttc
ttccttttgaacgacgacgacgacgaccagcctcaggggctgaccaaagaacagatcgac
aacctctccatgcgcagctttggggagagtgacgctttgaagacctgcagcgtctgcata
acggagtacgctgagggcaacaaactgcgcaagcttccctgttcccacgaataccacgtg
cactgcattgaccgctggctgtctgaaaactccacgtgtcccatctgccgcagagctgtc
ctagtgtcagccaaccgagagagtgtcatatga
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